RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 TAS1R1Q7RTX1 841 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 PRELID2Q8N945 189 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 FAM172AQ8WUF8 416 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 PGLYRP2Q96PD5 576 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 NAP1L3Q99457 506 aaPredicted RBP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 COLEC11Q9BWP8 271 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 CXorf56Q9H5V9 222 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 AMACRQ9UHK6 382 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 FAM169AQ9Y6X4 670 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 ESYT3A0FGR9 886 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 GOLGA6CA6NDK9 693 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 EIF3HO15372 352 aaKnown RBP eCLIP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 SART1O43290 800 aaKnown RBP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 RNF8O76064 485 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 OAZ2O95190 189 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 GOLGA6DP0CG33 693 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 RARAP10276 462 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 KRT10P13645 584 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 CYP2F1P24903 491 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 SDC4P31431 198 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 ATXN1P54253 815 aaKnown RBP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 WDR5P61964 334 aaKnown RBP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 ADCY2Q08462 1091 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 RTP2Q5QGT7 225 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 KAZNQ674X7 775 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 MFSD5Q6N075 450 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 CCDC70Q6NSX1 233 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 OTOP2Q7RTS6 562 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 HSPH1Q92598 858 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 SLITRK1Q96PX8 696 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 FAM118BQ9BPY3 351 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 TACO1Q9BSH4 297 aaKnown RBP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 ASNSD1Q9NWL6 643 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 GOLGA6AQ9NYA3 693 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 ABI2Q9NYB9 513 aaPredicted RBP13.09□□□□□ -0.31
CAPN9-201ENST00000271971 USP18Q9UMW8 372 aa13.09□□□□□ -0.31
CAPN9-201ENST00000271971 GOLGA6L10A0A0M3HER8 536 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CCDC188H7C350 402 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 SYN3O14994 580 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 OPA1O60313 960 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 GLI1P08151 1106 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CD48P09326 243 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 USP17L7P0C7H9 530 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 MRPS5P82675 430 aaKnown RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CTXN3Q4LDR2 81 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 LRRC38Q5VT99 294 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CYP4V2Q6ZWL3 525 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 SPATA2LQ8IUW3 424 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CNPY4Q8N129 248 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 ATG4AQ8WYN0 398 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 TOP1MTQ969P6 601 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 PLVAPQ9BX97 442 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 ZCWPW1Q9H0M4 648 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CWH43Q9H720 699 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CSNK1G1Q9HCP0 422 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 ABHD14A-ACY1A0A1B0GW23 586 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 DPYSL4O14531 572 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 HEXIM1O94992 359 aaKnown RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 MYBL2P10244 700 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 ARPP19P56211 112 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 SCYL2Q6P3W7 929 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 TTC27Q6P3X3 843 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 RSPO2Q6UXX9 243 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 B4GALNT4Q76KP1 1039 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 DEFB106AQ8N104 65 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 TTC9BQ8N6N2 239 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 C1orf54Q8WWF1 131 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 CAPS2Q9BXY5 557 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 OSBPL8Q9BZF1 889 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 STIM2Q9P246 746 aa13.08□□□□□ -0.32
CAPN9-201ENST00000271971 R3HDM2Q9Y2K5 976 aaKnown RBP13.08□□□□□ -0.32
CAPN9-201ENST00000271971 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 YJEFN3A6XGL0 299 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 E7ENQ6 273 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 TTI1O43156 1089 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 TRUB2O95900 331 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 FGFR3P22607 806 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 HDAC4P56524 1084 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 TRADDQ15628 312 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 MAPRE1Q15691 268 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 ODF2Q5BJF6 829 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 RAB41Q5JT25 222 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 SDHAF4Q5VUM1 108 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 ALS2CLQ60I27 953 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 PRSS55Q6UWB4 352 aaPredicted RBP13.07□□□□□ -0.32
CAPN9-201ENST00000271971 SPOCD1Q6ZMY3 1216 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
CAPN9-201ENST00000271971 UBE2Q1Q7Z7E8 422 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms