RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 PBKQ96KB5 322 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 LHX5Q9H2C1 402 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 SMOC2Q9H3U7 446 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 GOLPH3Q9H4A6 298 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 PDE2AO00408 941 aaPredicted RBP25.88■■□□□ 1.73
SSBP4-201ENST00000270061 RHOP08100 348 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 TMEM35BQ8NCS4 154 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 OR10T2Q8NGX3 314 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 ITFG1Q8TB96 612 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 FGF13Q92913 245 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 TMEM209Q96SK2 561 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 CDH7Q9ULB5 785 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 KIAA1257Q9ULG3 409 aa25.88■■□□□ 1.73
SSBP4-201ENST00000270061 PACSIN2Q9UNF0 486 aaPredicted RBP25.88■■□□□ 1.73
SSBP4-201ENST00000270061 CXCR5P32302 372 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 TWF1Q12792 350 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 PTP4A2Q12974 167 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 DUSP4Q13115 394 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 BMP8AQ7Z5Y6 402 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 PASD1Q8IV76 773 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 GPR161Q8N6U8 529 aaKnown RBP25.87■■□□□ 1.73
SSBP4-201ENST00000270061 NXPE3Q969Y0 559 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 PBXIP1Q96AQ6 731 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 ASIC4Q96FT7 647 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 ELOVL4Q9GZR5 314 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 ADAM22Q9P0K1 906 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 MRPS23Q9Y3D9 190 aaKnown RBP25.87■■□□□ 1.73
SSBP4-201ENST00000270061 ALG6Q9Y672 507 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 HUS1O60921 280 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 VNN2O95498 520 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 PAFAH1B1P43034 410 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 CORO1BQ9BR76 489 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 HCN4Q9Y3Q4 1203 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 YIPF1Q9Y548 306 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 CEP83Q9Y592 693 aa25.87■■□□□ 1.73
SSBP4-201ENST00000270061 FAM170AA1A519 330 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 MTMR11A4FU01 709 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 ATMINO43313 823 aaPredicted RBP25.86■■□□□ 1.73
SSBP4-201ENST00000270061 VDRP11473 427 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 MMP8P22894 467 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 CFAP221Q4G0U5 840 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 TEX35Q5T0J7 233 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 RSAD2Q8WXG1 361 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 ZNF512Q96ME7 567 aaPredicted RBP25.86■■□□□ 1.73
SSBP4-201ENST00000270061 TWNKQ96RR1 684 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 PSMB7Q99436 277 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 RTP3Q9BQQ7 232 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 ZCWPW1Q9H0M4 648 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 GDAP2Q9NXN4 497 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 RAPGEFL1Q9UHV5 662 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 SNX9Q9Y5X1 595 aa25.86■■□□□ 1.73
SSBP4-201ENST00000270061 RRM1P23921 792 aa25.85■■□□□ 1.73
SSBP4-201ENST00000270061 PLD1Q13393 1074 aa25.85■■□□□ 1.73
SSBP4-201ENST00000270061 SLC39A12Q504Y0 691 aa25.85■■□□□ 1.73
SSBP4-201ENST00000270061 ATAD1Q8NBU5 361 aa25.85■■□□□ 1.73
SSBP4-201ENST00000270061 CRISPLD1Q9H336 500 aa25.85■■□□□ 1.73
SSBP4-201ENST00000270061 CD19P15391 556 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 NDST1P52848 882 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 SLC5A9Q2M3M2 681 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 CCDC181Q5TID7 509 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 PLEKHA7Q6IQ23 1121 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 PDCL2Q8N4E4 241 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 WDTC1Q8N5D0 677 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 ING5Q8WYH8 240 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 NT5C1AQ9BXI3 368 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 MRPL47Q9HD33 250 aaKnown RBP25.84■■□□□ 1.73
SSBP4-201ENST00000270061 HMGXB4Q9UGU5 601 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 L1RE1Q9UN81 338 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 DUSP12Q9UNI6 340 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 MIF4GDA9UHW6 222 aaKnown RBP25.84■■□□□ 1.73
SSBP4-201ENST00000270061 KCNK3O14649 394 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 CALB1P05937 261 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 CNGA2Q16280 664 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 PDZD4Q76G19 769 aaPredicted RBP25.84■■□□□ 1.73
SSBP4-201ENST00000270061 LIMS2Q7Z4I7 341 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 NPAS3Q8IXF0 933 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 TMEM86AQ8N2M4 240 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 C11orf70Q9BRQ4 267 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 SELENOOQ9BVL4 669 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 HSFX1Q9UBD0 423 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 CHORDC1Q9UHD1 332 aaPredicted RBP25.84■■□□□ 1.73
SSBP4-201ENST00000270061 SLC27A5Q9Y2P5 690 aa25.84■■□□□ 1.73
SSBP4-201ENST00000270061 MUC6Q6W4X9 2439 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 ANHXE9PGG2 379 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 ZNF197O14709 1029 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 DDX3YO15523 660 aaKnown RBP25.83■■□□□ 1.73
SSBP4-201ENST00000270061 ALDH1A3P47895 512 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 SMARCB1Q12824 385 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 HTR4Q13639 388 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 CYP4A22Q5TCH4 519 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 UNC93AQ86WB7 457 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 SLC44A3Q8N4M1 653 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 NUMBLQ9Y6R0 609 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 SCINQ9Y6U3 715 aa25.83■■□□□ 1.73
SSBP4-201ENST00000270061 EPHB3P54753 998 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 TSPY1Q01534 308 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 MESDQ14696 234 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 STILQ15468 1287 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 MMS22LQ6ZRQ5 1243 aa25.82■■□□□ 1.72
SSBP4-201ENST00000270061 SUGP1Q8IWZ8 645 aaKnown RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms