RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 HMGCRP04035 888 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 CSE1LP55060 971 aaKnown RBP14.2□□□□□ -0.14
NPC1-201ENST00000269228 E2F5Q15329 346 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ANKRD20A4Q4UJ75 823 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ANKRD20A8PQ5CZ79 823 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ANKRD20A2Q5SQ80 823 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ANKRD20A1Q5TYW2 823 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ADCK2Q7Z695 626 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ZDHHC17Q8IUH5 632 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 HERC6Q8IVU3 1022 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 UNC45BQ8IWX7 931 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 UPF1Q92900 1129 aaKnown RBP eCLIP14.2□□□□□ -0.14
NPC1-201ENST00000269228 MRPL42Q9Y6G3 142 aaKnown RBP14.2□□□□□ -0.14
NPC1-201ENST00000269228 CACNA1FO60840 1977 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 IGKV6D-41A0A0C4DH26 115 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 PRPF4O43172 522 aaKnown RBP eCLIP14.2□□□□□ -0.14
NPC1-201ENST00000269228 MMP3P08254 477 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 PTPN1P18031 435 aaKnown RBP14.2□□□□□ -0.14
NPC1-201ENST00000269228 RGS4P49798 205 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 RHOAP61586 193 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 SLC6A3Q01959 620 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 CD99L2Q8TCZ2 262 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ACTRT1Q8TDG2 376 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ULBP1Q9BZM6 244 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 NT5MQ9NPB1 228 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 TSPAN3O60637 253 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 RHOBTB1O94844 696 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 LYPLA2O95372 231 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 NCKAP1LP55160 1127 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 WDR59Q6PJI9 974 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 ARL8AQ96BM9 186 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 EMILIN2Q9BXX0 1053 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 PPCSQ9HAB8 311 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 FAM47DPA6NHR8 397 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 TUFMP49411 452 aaKnown RBP14.2□□□□□ -0.14
NPC1-201ENST00000269228 STX3Q13277 289 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 EFTUD2Q15029 972 aaKnown RBP eCLIP14.2□□□□□ -0.142e-8■■■■■ 29.7
NPC1-201ENST00000269228 PALB2Q86YC2 1186 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 UBP1Q9NZI7 540 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 CD274Q9NZQ7 290 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.2□□□□□ -0.14
NPC1-201ENST00000269228 MARCOQ9UEW3 520 aaPredicted RBP14.2□□□□□ -0.14
NPC1-201ENST00000269228 SLC25A13Q9UJS0 675 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 DOLKQ9UPQ8 538 aa14.2□□□□□ -0.14
NPC1-201ENST00000269228 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 SERPIND1P05546 499 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 CKBP12277 381 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 ZNF467Q7Z7K2 595 aaPredicted RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 RTP1P59025 263 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 TBX2Q13207 712 aaPredicted RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 EPS8L1Q8TE68 723 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 FAM84AQ96KN4 292 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 CENPKQ9BS16 269 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 APOL5Q9BWW9 433 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 SCUBE2Q9NQ36 999 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 RRN3Q9NYV6 651 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 SUPT3HB4E1H0 165 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 TRIM49D1C9J1S8 452 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 SUPT3HO75486 399 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 ARF4P18085 180 aaPredicted RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 GRK4P32298 578 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 CCDC15Q0P6D6 951 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 TBCCQ15814 346 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 CCNG2Q16589 344 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 NOMO2Q5JPE7 1267 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 TTC39BQ5VTQ0 682 aaPredicted RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 SLC9A9Q8IVB4 645 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 FBXO36Q8NEA4 188 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 USP13Q92995 863 aaPredicted RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 TBCBQ99426 244 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 CEP41Q9BYV8 373 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 ROPN1BQ9BZX4 212 aaPredicted RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 ROPN1Q9HAT0 212 aaPredicted RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 ITGA7Q13683 1181 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 PCBP1Q15365 356 aaKnown RBP eCLIP14.19□□□□□ -0.14
NPC1-201ENST00000269228 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.19□□□□□ -0.14
NPC1-201ENST00000269228 CLEC4DQ8WXI8 215 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 SERPINB11Q96P15 392 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 CDK5RAP1Q96SZ6 601 aaKnown RBP14.19□□□□□ -0.14
NPC1-201ENST00000269228 IKZF4Q9H2S9 585 aa14.19□□□□□ -0.14
NPC1-201ENST00000269228 A0A0G2JLL6 359 aaPredicted RBP14.18□□□□□ -0.14
NPC1-201ENST00000269228 LTFP02788 710 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 MYL2P10916 166 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 MDH1P40925 334 aaKnown RBP14.18□□□□□ -0.14
NPC1-201ENST00000269228 HYIQ5T013 277 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 PRRT2Q7Z6L0 340 aaPredicted RBP14.18□□□□□ -0.14
NPC1-201ENST00000269228 UNC93AQ86WB7 457 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 TMEM199Q8N511 208 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 GBP5Q96PP8 586 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 UBXN6Q9BZV1 441 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 WWP1Q9H0M0 922 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 ADA2Q9NZK5 511 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 PPP1R37O75864 691 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 RTN3O95197 1032 aaPredicted RBP14.18□□□□□ -0.14
NPC1-201ENST00000269228 AMPD1P23109 780 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 SCNN1BP51168 640 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 GEMIN4P57678 1058 aaKnown RBP14.18□□□□□ -0.14
NPC1-201ENST00000269228 MIIPQ5JXC2 388 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 DENND1BQ6P3S1 775 aa14.18□□□□□ -0.14
NPC1-201ENST00000269228 PNKPQ96T60 521 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms