RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 HSF2BPO75031 334 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 SASH3O75995 380 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 TRUB2O95900 331 aaKnown RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 CDKN2BP42772 138 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 CARSP49589 748 aaKnown RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 MRPS25P82663 173 aaKnown RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 CASP8Q14790 479 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 CCDC14Q49A88 953 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 TRNP1Q6NT89 227 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 TTC27Q6P3X3 843 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 SPRED2Q7Z698 418 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 SCUBE3Q8IX30 993 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 CRIPAKQ8N1N5 446 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 CMASQ8NFW8 434 aaPredicted RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 SP7Q8TDD2 431 aaPredicted RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 CENPIQ92674 756 aaPredicted RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 SMARCD1Q96GM5 515 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 PCED1BQ96HM7 432 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 GAS2L1Q99501 681 aaPredicted RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 PKMYT1Q99640 499 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 MED10Q9BTT4 135 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 MRPL9Q9BYD2 267 aaKnown RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 DCLK3Q9C098 648 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 ACBD3Q9H3P7 528 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 CERS4Q9HA82 394 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 CSNK1G1Q9HCP0 422 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 PNPLA8Q9NP80 782 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 PCDHB7Q9Y5E2 793 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 C3orf70A6NLC5 250 aaPredicted RBP16.06■□□□□ 0.16
COPS3-201ENST00000268717 ZNF487B1APH4 448 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 IL1R2P27930 398 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 GJC1P36383 396 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 BRCC3P46736 316 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 BOLA3Q53S33 107 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 RAB41Q5JT25 222 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 OVOS1Q6IE37 1185 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 MFSD7Q6UXD7 560 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 CCDC105Q8IYK2 499 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 ABI1Q8IZP0 508 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 SCML4Q8N228 414 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 MREGQ8N565 214 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 HERPUD2Q9BSE4 406 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 DDX23Q9BUQ8 820 aaKnown RBP16.06■□□□□ 0.16
COPS3-201ENST00000268717 KRT82Q9NSB4 513 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 TIMM13Q9Y5L4 95 aaPredicted RBP16.06■□□□□ 0.16
COPS3-201ENST00000268717 COL4A4P53420 1690 aaPredicted RBP16.06■□□□□ 0.16
COPS3-201ENST00000268717 UNC80Q8N2C7 3258 aa16.06■□□□□ 0.16
COPS3-201ENST00000268717 MYBPHLA2RUH7 354 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 LRRD1A4D1F6 860 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ZSCAN5CA6NGD5 496 aaPredicted RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 EPOPA6NHQ4 379 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 SYN3O14994 580 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 PRPSAP2O60256 369 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 DAB1O75553 588 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 AP1G2O75843 785 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 DDHD2O94830 711 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ENDOD1O94919 500 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ECEL1O95672 775 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 KDELR1P24390 212 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 MRPS5P82675 430 aaKnown RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 TSPY1Q01534 308 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 LMNB2Q03252 620 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 RNASELQ05823 741 aaKnown RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 ADGRE1Q14246 886 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ATP13A4Q4VNC1 1196 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 TXNRD3NBQ6F5E7 133 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 STRADAQ7RTN6 431 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ZNF280BQ86YH2 543 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 RAPGEF5Q92565 580 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 RNF25Q96BH1 459 aaPredicted RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 FAM193BQ96PV7 902 aaPredicted RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 RC3H2Q9HBD1 1191 aaKnown RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 LRRC4Q9HBW1 653 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 CNGB3Q9NQW8 809 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 NFU1Q9UMS0 254 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 TSC2P49815 1807 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ESYT3A0FGR9 886 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 PIK3R2O00459 728 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 CLDN5O00501 218 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 MDM4O15151 490 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 OAZ2O95190 189 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 LCP1P13796 627 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ECHS1P30084 290 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 YWHAHQ04917 246 aaPredicted RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 ADCY1Q08828 1119 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ADIGQ0VDE8 80 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ZFYVE27Q5T4F4 411 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 NPAS4Q8IUM7 802 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 SIX6OS1Q8N1H7 587 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 TTC13Q8NBP0 860 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ATL2Q8NHH9 583 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 MAFAQ8NHW3 353 aaPredicted RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 IFT81Q8WYA0 676 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 ARNTL2Q8WYA1 636 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 MYLPFQ96A32 169 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 CASD1Q96PB1 797 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 TGS1Q96RS0 853 aaKnown RBP16.05■□□□□ 0.16
COPS3-201ENST00000268717 SMOQ99835 787 aa16.05■□□□□ 0.16
COPS3-201ENST00000268717 TMEM175Q9BSA9 504 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms