RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CIAPIN1Q6FI81 312 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 SPNS2Q8IVW8 549 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 LMNTD2Q8IXW0 634 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 RBM15BQ8NDT2 890 aaKnown RBP17.49■□□□□ 0.39
SQLE-201ENST00000265896 RXFP2Q8WXD0 754 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 STYXL1Q9Y6J8 313 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 LDHAP00338 332 aaKnown RBP17.49■□□□□ 0.39
SQLE-201ENST00000265896 PTPRAP18433 802 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 KCNA4P22459 653 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 ADORA2AP29274 412 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 MAP1SQ66K74 1059 aaPredicted RBP17.49■□□□□ 0.39
SQLE-201ENST00000265896 NDUFAF2Q8N183 169 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 TEX9Q8N6V9 391 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 ZNF483Q8TF39 744 aaPredicted RBP17.49■□□□□ 0.39
SQLE-201ENST00000265896 TEX13BQ9BXU2 312 aa17.49■□□□□ 0.39
SQLE-201ENST00000265896 DDX56Q9NY93 547 aaKnown RBP17.49■□□□□ 0.39
SQLE-201ENST00000265896 G3BP2Q9UN86 482 aaKnown RBP17.49■□□□□ 0.39
SQLE-201ENST00000265896 MAFBQ9Y5Q3 323 aaPredicted RBP17.49■□□□□ 0.39
SQLE-201ENST00000265896 LOC100653049A0A140TA62 436 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 PRR5-ARHGAP8B1AHC4 643 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 KRT34O76011 436 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 ARIH2O95376 493 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 EPHB1P54762 984 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 ARHGAP8P85298 464 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 CCDC142Q17RM4 750 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 TSNAXIP1Q2TAA8 658 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 VWA5B1Q5TIE3 1220 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 DCLRE1BQ9H816 532 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 SIGLEC16A6NMB1 481 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 PSMG1O95456 288 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 ETV4P43268 484 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
SQLE-201ENST00000265896 SLC25A3Q00325 362 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 PRKD1Q15139 912 aaPredicted RBP17.48■□□□□ 0.39
SQLE-201ENST00000265896 DRICH1Q6PGQ1 229 aaPredicted RBP17.48■□□□□ 0.39
SQLE-201ENST00000265896 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
SQLE-201ENST00000265896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.48■□□□□ 0.39
SQLE-201ENST00000265896 ACO2Q99798 780 aaKnown RBP17.48■□□□□ 0.39
SQLE-201ENST00000265896 MRPL4Q9BYD3 311 aaKnown RBP17.48■□□□□ 0.39
SQLE-201ENST00000265896 SIX4Q9UIU6 781 aa17.48■□□□□ 0.39
SQLE-201ENST00000265896 IQANK1A0A1B0GTG1 560 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 CCDC78A2IDD5 438 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 ARHGAP42A6NI28 874 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 FAM189A1O60320 539 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 PDE5AO76074 875 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 KRT7P08729 469 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 GNAT1P11488 350 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 ATXN3P54252 364 aaPredicted RBP17.47■□□□□ 0.39
SQLE-201ENST00000265896 YWHAZP63104 245 aaKnown RBP17.47■□□□□ 0.39
SQLE-201ENST00000265896 KLC1Q07866 573 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 ZNF667Q5HYK9 610 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 CDCA2Q69YH5 1023 aaPredicted RBP17.47■□□□□ 0.39
SQLE-201ENST00000265896 LRRC74BQ6ZQY2 392 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 C1orf127Q8N9H9 656 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 REPS2Q8NFH8 660 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 PPP1R14CQ8TAE6 165 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 APOPT1Q96IL0 206 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 CORO1CQ9ULV4 474 aaPredicted RBP17.47■□□□□ 0.39
SQLE-201ENST00000265896 CNTN6Q9UQ52 1028 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 TRUB2O95900 331 aaKnown RBP17.47■□□□□ 0.39
SQLE-201ENST00000265896 RPL10AP62906 217 aaKnown RBP17.47■□□□□ 0.39
SQLE-201ENST00000265896 Q3C1V9 767 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 RGS9BPQ6ZS82 235 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 NUDCD3Q8IVD9 361 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 UBR7Q8N806 425 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 SKA1Q96BD8 255 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 FOXP3Q9BZS1 431 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 ARHGEF4Q9NR80 690 aa17.47■□□□□ 0.39
SQLE-201ENST00000265896 DKC1O60832 514 aaKnown RBP eCLIP17.46■□□□□ 0.39
SQLE-201ENST00000265896 AP1G2O75843 785 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 STK10O94804 968 aaKnown RBP17.46■□□□□ 0.39
SQLE-201ENST00000265896 TNNC2P02585 160 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 CD1EP15812 388 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 EIF4BP23588 611 aaKnown RBP17.46■□□□□ 0.39
SQLE-201ENST00000265896 ANGEL2Q5VTE6 544 aaKnown RBP17.46■□□□□ 0.39
SQLE-201ENST00000265896 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 C7orf31Q8N865 590 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 SLC4A11Q8NBS3 891 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 CLEC4CQ8WTT0 213 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 SLC44A1Q8WWI5 657 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 PYDC1Q8WXC3 89 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 NDRG1Q92597 394 aaKnown RBP17.46■□□□□ 0.39
SQLE-201ENST00000265896 VPS11Q9H270 941 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 PLAC1Q9HBJ0 212 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 TMPRSS4Q9NRS4 437 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 APOC4-APOC2K7ER74 178 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 OGTO15294 1046 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 METTL18O95568 372 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 ZBED1O96006 694 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 APOC2P02655 101 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 GMPSP49915 693 aaPredicted RBP17.46■□□□□ 0.39
SQLE-201ENST00000265896 YWHAEP62258 255 aaKnown RBP17.46■□□□□ 0.39
SQLE-201ENST00000265896 GBE1Q04446 702 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 RALGPS1Q5JS13 557 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 LRRC38Q5VT99 294 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 JADE1Q6IE81 842 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 GSTCDQ8NEC7 633 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms