RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 HHLA1C9JL84 531 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 SEC31AO94979 1220 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 TJP3O95049 919 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 GLI1P08151 1106 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 CPB1P15086 417 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 FGFR3P22607 806 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 KDELR1P24390 212 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 ITGB8P26012 769 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 MATKP42679 507 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 FNTAP49354 379 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 ALDH7A1P49419 539 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 NDUFV1P49821 464 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 WDR5P61964 334 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 DEFB103AP81534 67 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 KLF1Q13351 362 aaPredicted RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 KRT81Q14533 505 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 NFE2Q16621 373 aaPredicted RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 CYP1B1Q16678 543 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 SH3PXD2AQ5TCZ1 1133 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 FAM117BQ6P1L5 589 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 MTERF4Q7Z6M4 381 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 GSPT2Q8IYD1 628 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 CCDC105Q8IYK2 499 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 ZDHHC14Q8IZN3 488 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 DEFB106AQ8N104 65 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 HNRNPLLQ8WVV9 542 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 RAPGEF5Q92565 580 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.02
COPS4-201ENST00000264389 VWCEQ96DN2 955 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 FUBP3Q96I24 572 aaKnown RBP eCLIP8.68□□□□□ -1.02
COPS4-201ENST00000264389 B3GALT6Q96L58 329 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 HERPUD2Q9BSE4 406 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 DDX23Q9BUQ8 820 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 GPR62Q9BZJ7 368 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 POPDC2Q9HBU9 364 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 EPB41L5Q9HCM4 733 aa8.68□□□□□ -1.02
COPS4-201ENST00000264389 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.68□□□□□ -1.02
COPS4-201ENST00000264389 UTP11Q9Y3A2 253 aaKnown RBP8.68□□□□□ -1.02
COPS4-201ENST00000264389 ESYT3A0FGR9 886 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 ZSCAN5CA6NGD5 496 aaPredicted RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 H7C4K7 107 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 CAPN9O14815 690 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 TRIM66O15016 1216 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 MDM4O15151 490 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 BAIAP3O94812 1187 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 ZBED1O96006 694 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 LTFP02788 710 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 USP17L7P0C7H9 530 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 ACRP10323 421 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 KRT10P13645 584 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 CYP2F1P24903 491 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 NOS2P35228 1153 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 COILP38432 576 aaPredicted RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 GRIK1P39086 918 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 CDKN2BP42772 138 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 CDH6P55285 790 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 HDAC4P56524 1084 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 YWHAZP63104 245 aaKnown RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 IFRD2Q12894 506 aaPredicted RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 SLC25A52Q3SY17 297 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 RAB6CQ53S08 254 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 DCAF6Q58WW2 860 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 TTC27Q6P3X3 843 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 ANKS3Q6ZW76 656 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 STRADAQ7RTN6 431 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 ANKS1BQ7Z6G8 1248 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 TMEM173Q86WV6 379 aaPredicted RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 JAMLQ86YT9 394 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 RFX6Q8HWS3 928 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 SCN4BQ8IWT1 228 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 KCTD6Q8NC69 237 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 GRK7Q8WTQ7 553 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 TEKT4Q8WW24 435 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 C1orf54Q8WWF1 131 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 IRGQQ8WZA9 623 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 GBF1Q92538 1859 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 NDRG1Q92597 394 aaKnown RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 TOP1MTQ969P6 601 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 CCDC114Q96M63 670 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 SLC2A13Q96QE2 648 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 TBCBQ99426 244 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 TRIM51Q9BSJ1 452 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 TTPALQ9BTX7 342 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 C11orf84Q9BUA3 381 aaPredicted RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 SNRNP25Q9BV90 132 aaKnown RBP8.67□□□□□ -1.02
COPS4-201ENST00000264389 CALN1Q9BXU9 219 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 DCLK3Q9C098 648 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 MCOLN1Q9GZU1 580 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 RAB6CQ9H0N0 254 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 CWH43Q9H720 699 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 LRRC19Q9H756 370 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 GDF3Q9NR23 364 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 CHST7Q9NS84 486 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 HOMER3Q9NSC5 361 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 PRKAG2Q9UGJ0 569 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 PCYOX1Q9UHG3 505 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 PCDHB5Q9Y5E4 795 aa8.67□□□□□ -1.02
COPS4-201ENST00000264389 OBSL1O75147 1896 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms