RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 LNX1Q8TBB1 728 aaPredicted RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 WNT8BQ93098 351 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 EPB41L5Q9HCM4 733 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 CACNG4Q9UBN1 327 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 CFAP69A5D8W1 941 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 PPEF2O14830 753 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 STAU1O95793 577 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 RPL17P18621 184 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ASPAP45381 313 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 UBXN11Q5T124 520 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 NUGGCQ68CJ6 796 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ARHGAP17Q68EM7 881 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.62□□□□□ -1.032e-7■■■■□ 24
GTF3C3-201ENST00000263956 ZNF280BQ86YH2 543 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 DDI1Q8WTU0 396 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 C1orf54Q8WWF1 131 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 MRRFQ96E11 262 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ZMAT2Q96NC0 199 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 CARD9Q9H257 536 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 DUSP10Q9Y6W6 482 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 PIRO00625 290 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ATP2C2O75185 946 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 FGF18O76093 207 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 GLI1P08151 1106 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 RARGP13631 454 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 LMO2P25791 158 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 PLTPP55058 493 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 MRPS5P82675 430 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 CENPCQ03188 943 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ERCC6LQ2NKX8 1250 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 GLE1Q53GS7 698 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 FAM183BPQ6ZVS7 135 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 REXO1L1PQ8IX06 675 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 PDIK1LQ8N165 341 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 KREMEN2Q8NCW0 462 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 MYRIPQ8NFW9 859 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 GSDMBQ8TAX9 411 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 SMG7Q92540 1137 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 PCED1BQ96HM7 432 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 IGSF21Q96ID5 467 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 SIX4Q9UIU6 781 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
GTF3C3-201ENST00000263956 ARHGAP42A6NI28 874 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 MTSS1O43312 755 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 TRUB2O95900 331 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 CPP00450 1065 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ATP5DP30049 168 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ETFBP38117 255 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 SLC12A2P55011 1212 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 BRD3Q15059 726 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 DENND2CQ68D51 928 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 CRYBG2Q8N1P7 616 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ATL2Q8NHH9 583 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 UCMAQ8WVF2 138 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 GPATCH2LQ9NWQ4 482 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 TAS2R14Q9NYV8 317 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 SLC9A3R1O14745 358 aaPredicted RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 GABRR2P28476 465 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 KCNT1Q5JUK3 1230 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ERMARDQ5T6L9 678 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 PCGF5Q86SE9 256 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 PDCD6IPQ8WUM4 868 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 CDKL2Q92772 493 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 BHMTQ93088 406 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 PABPC5Q96DU9 382 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 FSD1LQ9BXM9 530 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 HSD3B7Q9H2F3 369 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 DPEP3Q9H4B8 488 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 SIX2Q9NPC8 291 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 NUDT5Q9UKK9 219 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 FAM50BQ9Y247 325 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 PJA2O43164 708 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 NBNO60934 754 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 SOD2P04179 222 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ATAT1Q5SQI0 421 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 DDX53Q86TM3 631 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 DDX42Q86XP3 938 aaKnown RBP eCLIP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 CCDC63Q8NA47 563 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ADAM32Q8TC27 787 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ACSF2Q96CM8 615 aaPredicted RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 ARHGEF26Q96DR7 871 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 TTC1Q99614 292 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 DDX47Q9H0S4 455 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 CCDC68Q9H2F9 335 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 CYLDQ9NQC7 956 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 DNAJB4Q9UDY4 337 aa8.61□□□□□ -1.03
GTF3C3-201ENST00000263956 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 ZNF135P52742 658 aaPredicted RBP8.6□□□□□ -1.03
GTF3C3-201ENST00000263956 JAM2P57087 298 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms