RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 APOC4-APOC2K7ER74 178 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 TRAFD1O14545 582 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-201ENST00000263856 PRPSAP2O60256 369 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 KRT34O76011 436 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
CHMP3-201ENST00000263856 APOC2P02655 101 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 OSBPP22059 807 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 CLDN10P78369 228 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 TTC39BQ5VTQ0 682 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-201ENST00000263856 TRMT10BQ6PF06 316 aaKnown RBP12.89□□□□□ -0.35
CHMP3-201ENST00000263856 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
CHMP3-201ENST00000263856 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 UNC5BQ8IZJ1 945 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 SH3TC2Q8TF17 1288 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 DEPDC1BQ8WUY9 529 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 PPP1R36Q96LQ0 422 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 FGD4Q96M96 766 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 MYOZ2Q9NPC6 264 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 G3BP2Q9UN86 482 aaKnown RBP12.89□□□□□ -0.35
CHMP3-201ENST00000263856 GJA3Q9Y6H8 435 aa12.89□□□□□ -0.35
CHMP3-201ENST00000263856 SNRPAP09012 282 aaKnown RBP12.88□□□□□ -0.35
CHMP3-201ENST00000263856 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
CHMP3-201ENST00000263856 TAP1Q03518 808 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 IRGCQ6NXR0 463 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 GSTCDQ8NEC7 633 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 ZNF398Q8TD17 642 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 SLC26A7Q8TE54 656 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 MRPL4Q9BYD3 311 aaKnown RBP12.88□□□□□ -0.35
CHMP3-201ENST00000263856 CEP41Q9BYV8 373 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 DEFB129Q9H1M3 183 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 PPCSQ9HAB8 311 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 NDE1Q9NXR1 346 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 NDC80O14777 642 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 HNRNPCL1O60812 293 aaKnown RBP12.88□□□□□ -0.35
CHMP3-201ENST00000263856 OPHN1O60890 802 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 HMGCRP04035 888 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 ITGB3P05106 788 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 KCNA4P22459 653 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
CHMP3-201ENST00000263856 ZNF132P52740 706 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 BCAR1P56945 870 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 WDR49Q8IV35 697 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 MPP5Q8N3R9 675 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 ZNF184Q99676 751 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-201ENST00000263856 TUBB6Q9BUF5 446 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 MIS12Q9H081 205 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 NFASCO94856 1347 aa12.88□□□□□ -0.35
CHMP3-201ENST00000263856 TBC1D12O60347 775 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 SORBS2O94875 1100 aaKnown RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 CSH1P0DML2 217 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 CSH2P0DML3 217 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 RARBP10826 455 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ETS2P15036 469 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ETV4P43268 484 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 CXCL9Q07325 125 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 RBBP5Q15291 538 aaKnown RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 PPP1R2P3Q6NXS1 205 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 PHACTR1Q9C0D0 580 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 RNF19AQ9NV58 838 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 TCRBV5S1A1TA0A578 114 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ADCY3O60266 1144 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 NCF2P19878 526 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 SERPINB6P35237 376 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 GRIA1P42261 906 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ASPAP45381 313 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 STAT5BP51692 787 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 EEF1DP3Q658K8 133 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ATG16L1Q676U5 607 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ZBTB8OSQ8IWT0 167 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ULK2Q8IYT8 1036 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 CDHR1Q96JP9 859 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ANKRD27Q96NW4 1050 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 PANX3Q96QZ0 392 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 SMYD2Q9NRG4 433 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 MICAL2O94851 1124 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 C6orf222P0C671 652 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-201ENST00000263856 HSPA1LP34931 641 aa12.87□□□□□ -0.35
CHMP3-201ENST00000263856 RTP1P59025 263 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms