RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TRPM4Q8TD43 1214 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 SPACA7Q96KW9 195 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 GJB1P08034 283 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 BCAT1P54687 386 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 Q4G0T1 1027 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 ARHGEF19Q8IW93 802 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 RDM1Q8NG50 284 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 FAM111AQ96PZ2 611 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 COPS7BQ9H9Q2 264 aaPredicted RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 DMAP1Q9NPF5 467 aaPredicted RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 PEX10O60683 326 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 RPL10AP62906 217 aaKnown RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 TRIM32Q13049 653 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 UGP2Q16851 508 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 CALML6Q8TD86 181 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 LRRN4Q8WUT4 740 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 A0A087X0T9 212 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 ABCB1P08183 1280 aaPredicted RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 FAM228BP0C875 321 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 MLNP12872 115 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 MAPRE2Q15555 327 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 CENPTQ96BT3 561 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 STN1Q9H668 368 aaKnown RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 TSPAN16Q9UKR8 245 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 MICAL2O94851 1124 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 GPC1P35052 558 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 ALDH9A1P49189 494 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 PPATQ06203 517 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 YY1AP1Q9H869 796 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 TPST1O60507 370 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 GEMP55040 296 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 SDHAF4Q5VUM1 108 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 RGL4Q8IZJ4 473 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 EPS8L3Q8TE67 593 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 KRT35Q92764 455 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 PSD3Q9NYI0 1048 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 SNX8Q9Y5X2 465 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 ERI2A8K979 691 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 CYTH3O43739 400 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 ANXA9O76027 345 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 SLC2A3P11169 496 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 OR1E1P30953 314 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 LHX1P48742 406 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 KCNK10P57789 538 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 LGI2Q8N0V4 545 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 RIN3Q8TB24 985 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 NOP53Q9NZM5 478 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 TMEM120BA0PK00 339 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 AKAP3O75969 853 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 PARNO95453 639 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 SLC29A2Q14542 456 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 SYDE1Q6ZW31 735 aaPredicted RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 B3GALNT2Q8NCR0 500 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 APPL1Q9UKG1 709 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 MKL2Q9ULH7 1088 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 DLC1Q96QB1 1528 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 PHKG1Q16816 387 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 DET1Q7L5Y6 550 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 GRIN3AQ8TCU5 1115 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 CSGALNACT1Q8TDX6 532 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 OSBPL1AQ9BXW6 950 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 PCDHB5Q9Y5E4 795 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 SNRPAP09012 282 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 VIL1P09327 827 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 APOBEC3HQ6NTF7 200 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 KIAA2013Q8IYS2 634 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 GAD1Q99259 594 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 NT5C1B-RDH14C9J2C7 533 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 AP3B1O00203 1094 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 EFCAB14O75071 495 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 SCNN1GP51170 649 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 MARK2Q7KZI7 788 aaKnown RBP12.56□□□□□ -0.4
SPG11-201ENST00000261866 DAGLBQ8NCG7 672 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 PLEKHA8Q96JA3 519 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 CCDC3Q9BQI4 270 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 EMILIN2Q9BXX0 1053 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 ZFYVE1Q9HBF4 777 aa12.56□□□□□ -0.4
SPG11-201ENST00000261866 PRR23D1E9PI22 279 aaPredicted RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 VPS26AO75436 327 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 PRR23D2P0DMB1 279 aaPredicted RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 DACT2Q5SW24 774 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 OR9Q1Q8NGQ5 310 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 SLC2A14Q8TDB8 520 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 ZNF556Q9HAH1 456 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 MRPL40Q9NQ50 206 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 SETBP1Q9Y6X0 1596 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 SSU72P8A0A1W2PR75 194 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 CSHL1Q14406 222 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 WDR49Q8IV35 697 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 ATP8B4Q8TF62 1192 aa12.55□□□□□ -0.4
SPG11-201ENST00000261866 THUMPD3Q9BV44 507 aaKnown RBP12.55□□□□□ -0.4
SPG11-201ENST00000261866 GAS2O43903 313 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms