RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
SNCAIP-201ENST00000261367 NCANO14594 1321 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 SALL1Q9NSC2 1324 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 RBAK-RBAKDNI3L0D1 243 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 AXIN1O15169 862 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 PEX1O43933 1283 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 SNX2O60749 519 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 NOS1APO75052 506 aaPredicted RBP8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 VPS4BO75351 444 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 FARP2O94887 1054 aaPredicted RBP8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 PLEKHA8P1O95397 391 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ALOX12P18054 663 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 BGNP21810 368 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 CCND2P30279 289 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ST3GAL1Q11201 340 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 LSAMPQ13449 338 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 PICALMQ13492 652 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 QPRTQ15274 297 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 LRRC24Q50LG9 513 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 FAM45BPQ6NSW5 357 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 TLDC1Q6P9B6 456 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 CCDC149Q6ZUS6 474 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 LRRC8DQ7L1W4 858 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 SH3RF1Q7Z6J0 888 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 RAB2BQ8WUD1 216 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 FAM89AQ96GI7 184 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 TCF12Q99081 682 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 RTKNQ9BST9 563 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 GGA1Q9UJY5 639 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ASS1P00966 412 aaKnown RBP8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 NPR3P17342 541 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 PIK3R1P27986 724 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 TFDP1Q14186 410 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ARHGEF6Q15052 776 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 FAM98BQ52LJ0 330 aaKnown RBP8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 MROH9Q5TGP6 573 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 IGDCC4Q8TDY8 1250 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 FAM162AQ96A26 154 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 TAMM41Q96BW9 452 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ORAI2Q96SN7 254 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 SLC25A23Q9BV35 468 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 UGT2B28Q9BY64 529 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 TRMT6Q9UJA5 497 aaKnown RBP8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 MAPRE3Q9UPY8 281 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 INPP5FQ9Y2H2 1132 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ABCA3Q99758 1704 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 TMEM114B3SHH9 223 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 NTRK1P04629 796 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 GRIK1P39086 918 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 SLC26A3P40879 764 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 PRKCIP41743 596 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ACTR2P61160 394 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 CDK18Q07002 472 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 FAAH2Q6GMR7 532 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 FNDC8Q8TC99 324 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 DCUN1D1Q96GG9 259 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 GJB4Q9NTQ9 266 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 ANKRD6Q9Y2G4 727 aa8.59□□□□□ -1.03
SNCAIP-201ENST00000261367 H7C1W4 665 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 BTN3A3O00478 584 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 MAGEB2O15479 319 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 TALDO1P37837 337 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 CD151P48509 253 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 CDK9P50750 372 aaKnown RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 STILQ15468 1287 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 MOGQ16653 247 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 C5orf22Q49AR2 442 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 FASTKD1Q53R41 847 aaKnown RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 TMTC4Q5T4D3 741 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 ACAD10Q6JQN1 1059 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 BTN2A1Q7KYR7 527 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 STRA8Q7Z7C7 330 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 ZNF420Q8TAQ5 688 aaPredicted RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 TCP10LQ8TDR4 215 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 ACMSDQ8TDX5 336 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 RBM17Q96I25 401 aaKnown RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 AGBL1Q96MI9 1066 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 INPP4AQ96PE3 977 aaPredicted RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 C11orf70Q9BRQ4 267 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 UBE2OQ9C0C9 1292 aaKnown RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 DENND2DQ9H6A0 471 aaPredicted RBP8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 POLR1BQ9H9Y6 1135 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 SLC12A6Q9UHW9 1150 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 SYNPO2Q9UMS6 1093 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 PCDHA1Q9Y5I3 950 aa8.59□□□□□ -1.04
SNCAIP-201ENST00000261367 NUP188Q5SRE5 1749 aa8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 CLUHO75153 1309 aa8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 PAPPAQ13219 1627 aa8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 SLC22A2O15244 555 aa8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 GNA15P30679 374 aa8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 MYL6P60660 151 aa8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 CCDC85BQ15834 202 aaPredicted RBP8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 NEDD8Q15843 81 aa8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 TRIM71Q2Q1W2 868 aaKnown RBP8.58□□□□□ -1.04
SNCAIP-201ENST00000261367 CLNKQ7Z7G1 428 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms