RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TSPYL6Q8N831 410 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 COG1Q8WTW3 980 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PYROXD1Q8WU10 500 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 HIST1H2ACQ93077 130 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SMARCD1Q96GM5 515 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CEP19Q96LK0 163 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ACOX2Q99424 681 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 P2RX7Q99572 595 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 SYT15Q9BQS2 421 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 TRIM55Q9BYV6 548 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 EHD4Q9H223 541 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RASSF4Q9H2L5 321 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CNOT10Q9H9A5 744 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 CERS4Q9HA82 394 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 NPHS2Q9NP85 383 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RRAGDQ9NQL2 400 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 SETD4Q9NVD3 440 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 NDE1Q9NXR1 346 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SYNPO2Q9UMS6 1093 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 MAPRE3Q9UPY8 281 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 OAS3Q9Y6K5 1087 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 ADGRA2Q96PE1 1338 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SALL1Q9NSC2 1324 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PVALEFA0A1B0GWK0 134 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FAM234BA2RU67 622 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 DDTLA6NHG4 134 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 E9PMD0 336 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CBX4O00257 560 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PHF2O75151 1096 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 WFS1O76024 890 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PGK1P00558 417 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CATP04040 527 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 MCF2P10911 925 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 DDX6P26196 483 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNF38-201ENST00000259605 PBLDP30039 288 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 CCR1P32246 355 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 NAMPTP43490 491 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 GPR1P46091 355 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PLA2G4AP47712 749 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RAD23AP54725 363 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CSE1LP55060 971 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 TBX4P57082 545 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CDC16Q13042 620 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 NCOA4Q13772 614 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 MCM6Q14566 821 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 KRT71Q3SY84 523 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SLC9A4Q6AI14 798 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PTAR1Q7Z6K3 402 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 KRT77Q7Z794 578 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 TXNRD3Q86VQ6 643 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ANKLE1Q8NAG6 615 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FAM76AQ8TAV0 307 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SPPL2BQ8TCT7 592 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 GRIN3AQ8TCU5 1115 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CDCA3Q99618 268 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 EIF2AK1Q9BQI3 630 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 ACE2Q9BYF1 805 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 LMAN2LQ9H0V9 348 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CYP3A43Q9HB55 503 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ATP13A1Q9HD20 1204 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 DDIT4Q9NX09 232 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 NCKIPSDQ9NZQ3 722 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RNF14Q9UBS8 474 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ZC3H7BQ9UGR2 993 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 DNMT3LQ9UJW3 386 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 BARX2Q9UMQ3 279 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 TRIM35Q9UPQ4 493 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PCDHGB5Q9Y5G0 923 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SCGB2A1O75556 95 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 SLC35G4P0C7Q5 338 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 ELNP15502 786 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 HOXB8P17481 243 aaPredicted RBP4.17□□□□□ -1.74
RNF38-201ENST00000259605 PLCG1P19174 1290 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 KCNA5P22460 613 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 INPP5BP32019 993 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 CCT8P50990 548 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 CDH6P55285 790 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 OC90Q02509 493 aaPredicted RBP4.17□□□□□ -1.74
RNF38-201ENST00000259605 GRIK3Q13003 919 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 PDGFRLQ15198 375 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 FBXO47Q5MNV8 452 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 SNAP47Q5SQN1 464 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 SLC36A4Q6YBV0 504 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 CYP4Z1Q86W10 505 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 NPAS4Q8IUM7 802 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 RASGRP3Q8IV61 690 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 LRRC71Q8N4P6 559 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 USP7Q93009 1102 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 CNOT6LQ96LI5 555 aaKnown RBP4.17□□□□□ -1.74
RNF38-201ENST00000259605 OSMRQ99650 979 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 TTPALQ9BTX7 342 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 CCDC90BQ9GZT6 254 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 NIF3L1Q9GZT8 377 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 C8orf33Q9H7E9 229 aaPredicted RBP4.17□□□□□ -1.74
RNF38-201ENST00000259605 CYLDQ9NQC7 956 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNF38-201ENST00000259605 SCHIP1Q9P0W5 487 aaPredicted RBP4.17□□□□□ -1.74
RNF38-201ENST00000259605 CALCOCO1Q9P1Z2 691 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 PCDHGC3Q9UN70 934 aa4.17□□□□□ -1.74
RNF38-201ENST00000259605 GIT1Q9Y2X7 761 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms