RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 MYL4P12829 197 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CPA3P15088 417 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 GARTP22102 1010 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ACAT1P24752 427 aaKnown RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 PMLP29590 882 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 NPTX2P47972 431 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 DYNLT1P63172 113 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 MTM1Q13496 603 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 DPYSL3Q14195 570 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ADRM1Q16186 407 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ZACNQ401N2 412 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 TBC1D10BQ4KMP7 808 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CES4AQ5XG92 561 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 TMEM126BQ8IUX1 230 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ZFPM1Q8IX07 1006 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CTAGE3PQ8IX95 158 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 PPM1NQ8N819 430 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CATSPER1Q8NEC5 780 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ZFP28Q8NHY6 868 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 SHKBP1Q8TBC3 707 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 PIWIL2Q8TC59 973 aaKnown RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 ACSF2Q96CM8 615 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 SAE1Q9UBE0 346 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 PPP1R1BQ9UD71 204 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 CCNL1Q9UK58 526 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 INPP5FQ9Y2H2 1132 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 NRXN2Q9P2S2 1712 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 A0A0B4J269 797 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 FAM189A1O60320 539 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 RFPL1O75677 317 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 KRT38O76015 456 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 HNRNPCP07910 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
TROAP-201ENST00000257909 KRT7P08729 469 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 TBXAS1P24557 533 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 SCNN1DP51172 638 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CLDN10P78369 228 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 TUBB3Q13509 450 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 KRT81Q14533 505 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 SLC39A4Q6P5W5 647 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 THNSL1Q8IYQ7 743 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 FBXW8Q8N3Y1 598 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 METTL25Q8N6Q8 603 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 DCUN1D1Q96GG9 259 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 FRMD8Q9BZ67 464 aaPredicted RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 SLC13A1Q9BZW2 595 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 DHX33Q9H6R0 707 aaKnown RBP11.94□□□□□ -0.5
TROAP-201ENST00000257909 KMT5AQ9NQR1 393 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 SYNPO2Q9UMS6 1093 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 PSMD13Q9UNM6 376 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 CNTN6Q9UQ52 1028 aa11.94□□□□□ -0.5
TROAP-201ENST00000257909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 TCRBV5S1A1TA0A578 114 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 CAPN8A6NHC0 703 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 H3BNX3 289 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 CYB561D2O14569 222 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 DNAJA2O60884 412 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 PDE5AO76074 875 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 SSTR3P32745 418 aaPredicted RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 CRHR1P34998 444 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 TMED1Q13445 227 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 CNGA3Q16281 694 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 CRY2Q49AN0 593 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 UNC45BQ8IWX7 931 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 C4orf19Q8IY42 314 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 TAB3Q8N5C8 712 aaPredicted RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 PPP1R14CQ8TAE6 165 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 ABTB1Q969K4 478 aaPredicted RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 CCDC124Q96CT7 223 aaKnown RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 KCNK16Q96T55 309 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 FAM213AQ9BRX8 229 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 GRIP2Q9C0E4 1043 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 C20orf27Q9GZN8 174 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 C10orf88Q9H8K7 445 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 KCNH7Q9NS40 1196 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 C1QAP02745 245 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 CD48P09326 243 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 L1CAMP32004 1257 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 EMP3P54852 163 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 OGDHQ02218 1023 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 MYLK3Q32MK0 819 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 RARS2Q5T160 578 aaKnown RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 PQLC1Q8N2U9 271 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 FAM71DQ8N9W8 422 aa11.93□□□□□ -0.5
TROAP-201ENST00000257909 NTPCRQ9BSD7 190 aaKnown RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 SENP6Q9GZR1 1112 aaPredicted RBP11.93□□□□□ -0.5
TROAP-201ENST00000257909 TBCCD1Q9NVR7 557 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms