RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 BRMS1LQ5PSV4 323 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 UBA3Q8TBC4 463 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 PTPRN2Q92932 1015 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 UNC93B1Q9H1C4 597 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 A0A0A6YYK5 440 aaPredicted RBP13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 MIB1Q86YT6 1006 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 GANQ9H2C0 597 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 C4BP0C0L5 1744 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 FDPSP14324 419 aaKnown RBP13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 CAMK2GQ13555 558 aaPredicted RBP13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 REPS1Q96D71 796 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 PANX3Q96QZ0 392 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 MARCH2Q9P0N8 246 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 GTF2IRD1Q9UHL9 959 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 GRM6O15303 877 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 ZNF862O60290 1169 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 GLRA2P23416 452 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 TM4SF4P48230 202 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 ANKRD42Q8N9B4 389 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 CYTH2Q99418 400 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 GOLPH3LQ9H4A5 285 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 SYTL2Q9HCH5 934 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 IL23AQ9NPF7 189 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 H3BM21 787 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 HMOX2P30519 316 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 SUZ12Q15022 739 aaKnown RBP13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 NTRK3Q16288 839 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 PLPP4Q5VZY2 271 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 VPS37AQ8NEZ2 397 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 GIMAP7Q8NHV1 300 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 LRRC40Q9H9A6 602 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 COPS7BQ9H9Q2 264 aaPredicted RBP13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 ATP13A1Q9HD20 1204 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 SARS2Q9NP81 518 aaKnown RBP13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 TADA3O75528 432 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 LTFP02788 710 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 MSH3P20585 1137 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 ARHGDIAP52565 204 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 BCL2L1Q07817 233 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 ZNF296Q8WUU4 475 aaPredicted RBP13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 MTMR9Q96QG7 549 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 AHSPQ9NZD4 102 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 MAPRE3Q9UPY8 281 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 ERVW-1Q9UQF0 538 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 TIMM44O43615 452 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 NOS2P35228 1153 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 GAD2Q05329 585 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 STK4Q13043 487 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 TRIM59Q8IWR1 403 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 YIPF2Q9BWQ6 316 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 ASPSCR1Q9BZE9 553 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 RIC8BQ9NVN3 520 aa13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 UBA2Q9UBT2 640 aaPredicted RBP13.9□□□□□ -0.18
PRPF38A-201ENST00000257181 MEIS2O14770 477 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 SUPT3HO75486 399 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 TCEA2Q15560 299 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 RBBP7Q16576 425 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 NFIL3Q16649 462 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 RBPJLQ9UBG7 517 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 TRMT6Q9UJA5 497 aaKnown RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ADAM28Q9UKQ2 775 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 CRYL1Q9Y2S2 319 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 MAFBQ9Y5Q3 323 aaPredicted RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 LRRC72A6NJI9 287 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 EIF4E1BA6NMX2 242 aaKnown RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 CASQ2O14958 399 aaPredicted RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 PHF2O75151 1096 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 CCNDBP1O95273 360 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 SMPD1P17405 629 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 LBX1P52954 281 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 TLE2Q04725 743 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 GPS1Q13098 491 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ANKRD20A4Q4UJ75 823 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ANKRD20A8PQ5CZ79 823 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ANKRD20A2Q5SQ80 823 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ANKRD20A1Q5TYW2 823 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 FBXL19Q6PCT2 694 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 PRUNE1Q86TP1 453 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 MON1AQ86VX9 555 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 CBWD2Q8IUF1 395 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 RIBC1Q8N443 379 aaPredicted RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 COL22A1Q8NFW1 1626 aaPredicted RBP13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 SYCE1LA8MT33 242 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 TBC1D4O60343 1298 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 NPR3P17342 541 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 HIF1AQ16665 826 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 PADI3Q9ULW8 664 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 ANP32DO95626 131 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 AKAP5P24588 427 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 SLC6A3Q01959 620 aa13.89□□□□□ -0.19
PRPF38A-201ENST00000257181 SLC20A2Q08357 652 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms