RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ACAP1Q15027 740 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 TAF5Q15542 800 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 PDXDC2PQ6P474 469 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 BTN2A1Q7KYR7 527 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 CD302Q8IX05 232 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 DSEQ9UL01 958 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 SLC39A10Q9ULF5 831 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 PTGES3LE9PB15 166 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 EIF3DO15371 548 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 AKAP5P24588 427 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 CNTFP26441 200 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 AP3M2P53677 418 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 TRAP1Q12931 704 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 FUT11Q495W5 492 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 PYDC1Q8WXC3 89 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 IL25Q9H293 177 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 TCF7L2Q9NQB0 619 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 RIMS1Q86UR5 1692 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 DENND3A2RUS2 1198 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 RIPK2O43353 540 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 ENTPD5O75356 428 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 MTRF1O75570 445 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 PRLP01236 227 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 ASNSP08243 561 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 PRELPP51888 382 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 KCTD2Q14681 263 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 GALNT15Q8N3T1 639 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 SFRP1Q8N474 314 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 MKNK1Q9BUB5 465 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 EHD3Q9NZN3 535 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 PNPLA7Q6ZV29 1317 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 TRIM43BA6NCK2 446 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 SPDYE5A6NIY4 337 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 SLC16A4O15374 487 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 MTM1Q13496 603 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 SPDYE7PQ495Y7 208 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 LIN52Q52LA3 116 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 RNF43Q68DV7 783 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 PKN3Q6P5Z2 889 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 KIAA0408Q6ZU52 694 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 NSMCE2Q96MF7 247 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 DDX50Q9BQ39 737 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 NAT9Q9BTE0 207 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 MLPHQ9BV36 600 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 CRNNQ9UBG3 495 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 SORCS3Q9UPU3 1222 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 NPTXRO95502 500 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 ATP12AP54707 1039 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 RAB25P57735 213 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 STXBP2Q15833 593 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 DGKKQ5KSL6 1271 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 ERMARDQ5T6L9 678 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 PPP1R18Q6NYC8 613 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 POTEGQ6S5H5 508 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 NEK10Q6ZWH5 1172 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 DHDDSQ86SQ9 333 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 CENPLQ8N0S6 344 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP13Q92995 863 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 SGF29Q96ES7 293 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 FAM118BQ9BPY3 351 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 DGCR6LQ9BY27 220 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 COPS7BQ9H9Q2 264 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 POLR1BQ9H9Y6 1135 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 TRNAU1APQ9NX07 287 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 WBP11Q9Y2W2 641 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 USP32Q8NFA0 1604 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 MROH2AA6NES4 1674 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 POLR2EP19388 210 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 MAGEA10P43363 369 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 HSD17B4P51659 736 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 JAK3P52333 1124 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 PTENP60484 403 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 RUNDC3AQ59EK9 446 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 KLHDC7AQ5VTJ3 777 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 FBXW8Q8N3Y1 598 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 WDR36Q8NI36 951 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 PSMA8Q8TAA3 256 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 FRMD8P1Q9BZ68 369 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 KCND1Q9NSA2 647 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 GIN1Q9NXP7 522 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 TMCC3Q9ULS5 477 aa13.57□□□□□ -0.24
PCDHGA3-201ENST00000253812 A0A1W2PRG6 482 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 PPP1R3GB7ZBB8 358 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 AP5Z1O43299 807 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 PLEKP08567 350 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 RRM2P31350 389 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 EXOSC10Q01780 885 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 NFIL3Q16649 462 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 BROXQ5VW32 411 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 FBXO36Q8NEA4 188 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF669Q96BR6 464 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 KAZALD1Q96I82 304 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 COMMD8Q9NX08 183 aa13.56□□□□□ -0.24
PCDHGA3-201ENST00000253812 STARD13Q9Y3M8 1113 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms