RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 EEF1DP3Q658K8 133 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 FAM91A1Q658Y4 838 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 CHSY1Q86X52 802 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 TUBGCP5Q96RT8 1024 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 SGIP1Q9BQI5 828 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 PTPRHQ9HD43 1115 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 PCDHGC3Q9UN70 934 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 POLIQ9UNA4 740 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 PPME1Q9Y570 386 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 ADM5C9JUS6 153 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 F8W8V4 182 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 MAGEC1O60732 1142 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 ANPEPP15144 967 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 BGNP21810 368 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 SURF1Q15526 300 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 LRRC38Q5VT99 294 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 DENND1BQ6P3S1 775 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 MPZL3Q6UWV2 235 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 IZUMO2Q6UXV1 221 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 ARHGAP24Q8N264 748 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 TMEM130Q8N3G9 435 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 NLRP4Q96MN2 994 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 PHACTR1Q9C0D0 580 aa19.72■□□□□ 0.75
SNX4-201ENST00000251775 SGK1O00141 431 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 NOP56O00567 594 aaKnown RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 LPXNO60711 386 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 ITGAVP06756 1048 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 KLHL38Q2WGJ6 581 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 TBC1D25Q3MII6 688 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 TSHZ1Q6ZSZ6 1077 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 ALYREFQ86V81 257 aaKnown RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 COPS5Q92905 334 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 NKD2Q969F2 451 aaPredicted RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 OTUD5Q96G74 571 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 ZNF518BQ9C0D4 1074 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 ELP3Q9H9T3 547 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 TXNRD2Q9NNW7 524 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 TJP2Q9UDY2 1190 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 FAM237BA0A1B0GVD1 139 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 B2RBV5 119 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 E5RJQ4 531 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 GAS2O43903 313 aaKnown RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 ITGBL1O95965 494 aaPredicted RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 EIF4BP23588 611 aaKnown RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 ATF7IP2Q5U623 682 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 PLPPR4Q7Z2D5 763 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 TMEM192Q8IY95 271 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 NCSTNQ92542 709 aa19.71■□□□□ 0.75
SNX4-201ENST00000251775 NXF1Q9UBU9 619 aaKnown RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 DICER1Q9UPY3 1922 aaKnown RBP19.71■□□□□ 0.75
SNX4-201ENST00000251775 hCG_1818297A0A087WSY0 165 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 A0A0G2JLL6 359 aaPredicted RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 H3BRJ5 948 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 INO80B-WBP1J3KQ70 363 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 ACKR2O00590 384 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 RAP1GAPP47736 663 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 DSG1Q02413 1049 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 PIGHQ14442 188 aaPredicted RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 PRRT2Q7Z6L0 340 aaPredicted RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 TREML1Q86YW5 311 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 FBXO36Q8NEA4 188 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 CCDC110Q8TBZ0 833 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 TTC17Q96AE7 1141 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 FAM111AQ96PZ2 611 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 PANX3Q96QZ0 392 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 ECSITQ9BQ95 431 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 SPATA16Q9BXB7 569 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 INO80BQ9C086 356 aaPredicted RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 C2orf40Q9H1Z8 148 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 FZD8Q9H461 694 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 CYTH4Q9UIA0 394 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 SRCAPQ6ZRS2 3230 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 ERFP50548 548 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 MTM1Q13496 603 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 Q3C1V9 767 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 PTPN20Q4JDL3 420 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 RIPOR1Q6ZS17 1223 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 NET1Q7Z628 596 aaPredicted RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 MYLK4Q86YV6 388 aaPredicted RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 TMPRSS6Q8IU80 811 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 FBXO16Q8IX29 292 aaPredicted RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 ARHGAP18Q8N392 663 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 RBM15BQ8NDT2 890 aaKnown RBP19.7■□□□□ 0.74
SNX4-201ENST00000251775 CPT1BQ92523 772 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 CLMNQ96JQ2 1002 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 SPATA33Q96N06 139 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 MINDY3Q9H8M7 445 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 CNTN3Q9P232 1028 aa19.7■□□□□ 0.74
SNX4-201ENST00000251775 CAPN14A8MX76 684 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 B4GALT4O60513 344 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 IL1BP01584 269 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 TNNC2P02585 160 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 RFC1P35251 1148 aaPredicted RBP19.69■□□□□ 0.74
SNX4-201ENST00000251775 CDKN2BP42772 138 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 PSMC4P43686 418 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 TFDP3Q5H9I0 405 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 RASIP1Q5U651 963 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 NIPA2Q8N8Q9 360 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 SERAC1Q96JX3 654 aa19.69■□□□□ 0.74
SNX4-201ENST00000251775 UBE2OQ9C0C9 1292 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms