RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 CCDC142Q17RM4 750 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 INTS6LQ5JSJ4 861 aaKnown RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 SNX29Q8TEQ0 813 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 FGF11Q92914 225 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 GABRG3Q99928 467 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 MSTO1Q9BUK6 570 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 TIPINQ9BVW5 301 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 SEMA4CQ9C0C4 833 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 DDX43Q9NXZ2 648 aaKnown RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 LRWD1Q9UFC0 647 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 STARD13Q9Y3M8 1113 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 C2CD2Q9Y426 696 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 TLN1Q9Y490 2541 aaKnown RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 RAD54BQ9Y620 910 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 HOXC11O43248 304 aaPredicted RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 CTDNEP1O95476 244 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 OLFM2O95897 454 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 MSNP26038 577 aaKnown RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 DDX42Q86XP3 938 aaKnown RBP eCLIP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 SPACA3Q8IXA5 215 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 FUBP3Q96I24 572 aaKnown RBP eCLIP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 NRSN2Q9GZP1 204 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 EIF2B4Q9UI10 523 aaKnown RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 CPSF3Q9UKF6 684 aaKnown RBP12.78□□□□□ -0.36
RFPL3-201ENST00000249007 PCDHB6Q9Y5E3 794 aa12.78□□□□□ -0.36
RFPL3-201ENST00000249007 COL5A1P20908 1838 aaPredicted RBP12.77□□□□□ -0.36
RFPL3-201ENST00000249007 ZNF840PA6NDX5 716 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 H0YCG3 227 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 TRIM24O15164 1050 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 ABL1P00519 1130 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 NTRK1P04629 796 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 FDPSP14324 419 aaKnown RBP12.77□□□□□ -0.37
RFPL3-201ENST00000249007 GUCY2CP25092 1073 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 CDC25AP30304 524 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 CSNK1EP49674 416 aaKnown RBP12.77□□□□□ -0.37
RFPL3-201ENST00000249007 CSRP3P50461 194 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
RFPL3-201ENST00000249007 AFF3P51826 1226 aaKnown RBP12.77□□□□□ -0.37
RFPL3-201ENST00000249007 CLDN6P56747 220 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 USP46P62068 366 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 MYL7Q01449 175 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 RTP5Q14D33 572 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 ZNF174Q15697 407 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 KIF19Q2TAC6 998 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 ANO4Q32M45 955 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 INAVAQ3KP66 663 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 TMEM176AQ96HP8 235 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 ZNF560Q96MR9 790 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 TSPYL1Q9H0U9 437 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 ASB7Q9H672 318 aa12.77□□□□□ -0.37
RFPL3-201ENST00000249007 A0A0B4J269 797 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 E2F8A0AVK6 867 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 METTL12A8MUP2 240 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 PCDHGA12O60330 932 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 OAS1P00973 400 aaKnown RBP12.76□□□□□ -0.37
RFPL3-201ENST00000249007 MBL2P11226 248 aaPredicted RBP12.76□□□□□ -0.37
RFPL3-201ENST00000249007 MAGEA11P43364 429 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 PPP3CCP48454 512 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 CCT8P50990 548 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 FOSBP53539 338 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 KCNH2Q12809 1159 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
RFPL3-201ENST00000249007 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
RFPL3-201ENST00000249007 TRIM29Q14134 588 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 LY6DQ14210 128 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 GRAMD4Q6IC98 578 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 C1orf216Q8TAB5 229 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 SPATA17Q96L03 361 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 USP36Q9P275 1121 aaKnown RBP12.76□□□□□ -0.37
RFPL3-201ENST00000249007 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 PCDHGA1Q9Y5H4 931 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 SNX11Q9Y5W9 270 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 TMEM131Q92545 1883 aa12.76□□□□□ -0.37
RFPL3-201ENST00000249007 CREBBPQ92793 2442 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 BRINP1O60477 761 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 PFKFB2O60825 505 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 HUS1O60921 280 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 GRIK1P39086 918 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 PNPLA4P41247 253 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 ACOT2P49753 483 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 METTL3Q86U44 580 aaKnown RBP12.75□□□□□ -0.37
RFPL3-201ENST00000249007 TMEM86AQ8N2M4 240 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 SCFD1Q8WVM8 642 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 LGMNQ99538 433 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 SPHK2Q9NRA0 654 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 DNAJC17Q9NVM6 304 aaKnown RBP12.75□□□□□ -0.37
RFPL3-201ENST00000249007 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 NUMA1Q14980 2115 aa12.75□□□□□ -0.37
RFPL3-201ENST00000249007 MYLKQ15746 1914 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms