RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SOX13Q9UN79 622 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 MAGEA13PA6NCF6 341 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 B3GAT3O94766 335 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 CELF2O95319 508 aaKnown RBP11.92□□□□□ -0.5
LAMA4-201ENST00000230538 IRX1P78414 480 aaPredicted RBP11.92□□□□□ -0.5
LAMA4-201ENST00000230538 CHRNB3Q05901 458 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 SEL1L3Q68CR1 1132 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 HNRNPLLQ8WVV9 542 aaKnown RBP11.92□□□□□ -0.5
LAMA4-201ENST00000230538 POP1Q99575 1024 aaKnown RBP11.92□□□□□ -0.5
LAMA4-201ENST00000230538 CGRRF1Q99675 332 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 DYRK1BQ9Y463 629 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 A0A087X0T9 212 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 DLGAP3O95886 979 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 FAM228BP0C875 321 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 NQO1P15559 274 aaKnown RBP11.92□□□□□ -0.5
LAMA4-201ENST00000230538 BCAT1P54687 386 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 BNC2Q6ZN30 1099 aaPredicted RBP11.92□□□□□ -0.5
LAMA4-201ENST00000230538 STRA8Q7Z7C7 330 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 FICDQ9BVA6 458 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 CXorf56Q9H5V9 222 aa11.92□□□□□ -0.5
LAMA4-201ENST00000230538 STN1Q9H668 368 aaKnown RBP11.92□□□□□ -0.5
LAMA4-201ENST00000230538 F9P00740 461 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 PCNAP12004 261 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 RPS7P62081 194 aaKnown RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 MTERF3Q96E29 417 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 TMEM169Q96HH4 297 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 TMCC3Q9ULS5 477 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CAPN6Q9Y6Q1 641 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 RGS5O15539 181 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 SUPT20HL2P0C7V6 817 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 MLH1P40692 756 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 TMED10P49755 219 aaKnown RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 HUNKP57058 714 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 EIF2B5Q13144 721 aaKnown RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CYB5D1Q6P9G0 228 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 SCUBE1Q8IWY4 988 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 OPTNQ96CV9 577 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 EMILIN2Q9BXX0 1053 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CLPBQ9H078 707 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 USP18Q9UMW8 372 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 DRG1Q9Y295 367 aaKnown RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CPS1P31327 1500 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 NR5A2O00482 541 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CPSF4O95639 269 aaKnown RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 VTNP04004 478 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 VCLP18206 1134 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 NUMBP49757 651 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 C11orf63Q6NUN7 778 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CYP4Z1Q86W10 505 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 FAM136AQ96C01 138 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 MAN1C1Q9NR34 630 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 ZC3H11AO75152 810 aaKnown RBP eCLIP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CRTAMO95727 393 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 ANKS6Q68DC2 871 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 ATP8B4Q8TF62 1192 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 PDGFCQ9NRA1 345 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 PDP2Q9P2J9 529 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 DNAJC16Q9Y2G8 782 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 SNX13Q9Y5W8 968 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CNTFP26441 200 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 TOB1P50616 345 aaPredicted RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CLCN3P51790 818 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 CASP10Q92851 521 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 ZKSCAN4Q969J2 545 aaPredicted RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 RPS6KB2Q9UBS0 482 aa11.91□□□□□ -0.5
LAMA4-201ENST00000230538 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
LAMA4-201ENST00000230538 PSMC3P17980 439 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 NPTX2P47972 431 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 GTF2A2P52657 109 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 PAN2Q504Q3 1202 aaKnown RBP11.9□□□□□ -0.5
LAMA4-201ENST00000230538 SPOCD1Q6ZMY3 1216 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 TDRD5Q8NAT2 981 aaKnown RBP11.9□□□□□ -0.5
LAMA4-201ENST00000230538 DDI1Q8WTU0 396 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 PAFAH2Q99487 392 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 CTNNAL1Q9UBT7 734 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 PLAGL2Q9UPG8 496 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 AP4E1Q9UPM8 1137 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 AP4S1Q9Y587 144 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 GARTP22102 1010 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 VPS72Q15906 364 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 EZH2Q15910 746 aaKnown RBP11.9□□□□□ -0.5
LAMA4-201ENST00000230538 ZNF284Q2VY69 593 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 ALFQ53S48 1182 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 DNAAF5Q86Y56 855 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 UCMAQ8WVF2 138 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 MRPS31Q92665 395 aaKnown RBP11.9□□□□□ -0.5
LAMA4-201ENST00000230538 GLMNQ92990 594 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 GTF2A1LQ9UNN4 478 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 MAP3K13O43283 966 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 PLA2G6O60733 806 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 ENDOD1O94919 500 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 KCNMA1Q12791 1236 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 GIT2Q14161 759 aa11.9□□□□□ -0.5
LAMA4-201ENST00000230538 KPNB1Q14974 876 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms