RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 ARHGAP18Q8N392 663 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.14□□□□□ -0.31
PITRM1-201ENST00000224949 MCPH1Q8NEM0 835 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 CLEC4DQ8WXI8 215 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 HIC2Q96JB3 615 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 DHRS4Q9BTZ2 278 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 HAPLN2Q9GZV7 340 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 RHBDL2Q9NX52 303 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 HERC5Q9UII4 1024 aaKnown RBP13.14□□□□□ -0.31
PITRM1-201ENST00000224949 PLLPQ9Y342 182 aa13.14□□□□□ -0.31
PITRM1-201ENST00000224949 DGAT1O75907 488 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 LYPLA2O95372 231 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 DHRS4L1P0CG22 281 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 BBS12Q6ZW61 710 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 DHDDSQ86SQ9 333 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 MYLK4Q86YV6 388 aaPredicted RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 WDR75Q8IWA0 830 aaKnown RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 CCDC60Q8IWA6 550 aaPredicted RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 KIAA0319LQ8IZA0 1049 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 PIP4K2CQ8TBX8 421 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 MPP4Q96JB8 637 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 PDCD2LQ9BRP1 358 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 CYP26B1Q9NR63 512 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 SLC17A6Q9P2U8 582 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 F8W8V4 182 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 DLGAP5Q15398 846 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 SLC5A9Q2M3M2 681 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 PTPN20Q4JDL3 420 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 VWA5B1Q5TIE3 1220 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 LRRC38Q5VT99 294 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 TRIM42Q8IWZ5 723 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 TMEM130Q8N3G9 435 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 FAM81AQ8TBF8 368 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 DEPDC1BQ8WUY9 529 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 OLFM3Q96PB7 478 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 XAB2Q9HCS7 855 aaKnown RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 APOBEC2Q9Y235 224 aaKnown RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 HBS1LQ9Y450 684 aaKnown RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
PITRM1-201ENST00000224949 ZNF536O15090 1300 aa13.13□□□□□ -0.31
PITRM1-201ENST00000224949 RXRBP28702 533 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 MIPP30301 263 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 MRPS5P82675 430 aaKnown RBP13.12□□□□□ -0.31
PITRM1-201ENST00000224949 KRT81Q14533 505 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 RAB6CQ53S08 254 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 SH3PXD2AQ5TCZ1 1133 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 TRMT10BQ6PF06 316 aaKnown RBP13.12□□□□□ -0.31
PITRM1-201ENST00000224949 DEFB107AQ8IZN7 70 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 NME8Q8N427 588 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 RAB6CQ9H0N0 254 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 S100A14Q9HCY8 104 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 RAG1P15918 1043 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 SLC18A2Q05940 514 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 MAP7Q14244 749 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 EMC2Q15006 297 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 HPS6Q86YV9 775 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 DRAXINQ8NBI3 349 aaPredicted RBP13.12□□□□□ -0.31
PITRM1-201ENST00000224949 HNRNPRO43390 633 aaKnown RBP13.12□□□□□ -0.31
PITRM1-201ENST00000224949 ITM2AO43736 263 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 KRT38O76015 456 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 ZBED1O96006 694 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 CSH1P0DML2 217 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 CSH2P0DML3 217 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 OSBPP22059 807 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 GMPRP36959 345 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 CDH8P55286 799 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 CCDC142Q17RM4 750 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 THNSL1Q8IYQ7 743 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 WDTC1Q8N5D0 677 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 CGRRF1Q99675 332 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 KLHL4Q9C0H6 718 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 USP21Q9UK80 565 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 ADAMTS6Q9UKP5 1117 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 PLA2G4CQ9UP65 541 aa13.12□□□□□ -0.31
PITRM1-201ENST00000224949 E7ESA3 106 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 PFDN1O60925 122 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 TRPA1O75762 1119 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 CRABP2P29373 138 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 POLR2BP30876 1174 aaKnown RBP13.11□□□□□ -0.31
PITRM1-201ENST00000224949 MSX2P35548 267 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-201ENST00000224949 COPAP53621 1224 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 YWHAZP63104 245 aaKnown RBP13.11□□□□□ -0.31
PITRM1-201ENST00000224949 FASTKD1Q53R41 847 aaKnown RBP13.11□□□□□ -0.31
PITRM1-201ENST00000224949 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-201ENST00000224949 FAM102AQ5T9C2 384 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-201ENST00000224949 UNC5BQ8IZJ1 945 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 ATXN7L3BQ96GX2 97 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 CNTN3Q9P232 1028 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 POLIQ9UNA4 740 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 CAPN8A6NHC0 703 aa13.11□□□□□ -0.31
PITRM1-201ENST00000224949 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms