RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 TRIM49D1C9J1S8 452 aa15.33■□□□□ 0.04
UBR5-201ENST00000220959 PABPC1P11940 636 aaKnown RBP15.33■□□□□ 0.04
UBR5-201ENST00000220959 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.04
UBR5-201ENST00000220959 SPACA7Q96KW9 195 aa15.33■□□□□ 0.04
UBR5-201ENST00000220959 IARS2Q9NSE4 1012 aaKnown RBP15.33■□□□□ 0.04
UBR5-201ENST00000220959 AKAP7Q9P0M2 348 aaPredicted RBP15.33■□□□□ 0.04
UBR5-201ENST00000220959 VPS28Q9UK41 221 aa15.33■□□□□ 0.04
UBR5-201ENST00000220959 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.04
UBR5-201ENST00000220959 TRIM24O15164 1050 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 NME5P56597 212 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 XRRA1Q6P2D8 792 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 CENPXA8MT69 81 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 FAM220BPB1ANY3 271 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 EIF3HO15372 352 aaKnown RBP eCLIP15.32■□□□□ 0.041e-6■■■■□ 20.2
UBR5-201ENST00000220959 PSMC3P17980 439 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 GRK2P25098 689 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 PRAMEF18Q5VWM3 479 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 CDC42EP5Q6NZY7 148 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
UBR5-201ENST00000220959 PDGFCQ9NRA1 345 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 THG1LQ9NWX6 298 aaKnown RBP15.32■□□□□ 0.04
UBR5-201ENST00000220959 PCDHB12Q9Y5F1 795 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 NUDT14O95848 222 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 PDHBP11177 359 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 SGCGQ13326 291 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 ACSF2Q96CM8 615 aaPredicted RBP15.32■□□□□ 0.04
UBR5-201ENST00000220959 MRPL39Q9NYK5 338 aaKnown RBP15.32■□□□□ 0.04
UBR5-201ENST00000220959 NEO1Q92859 1461 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 RALGDSQ12967 914 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 PRKAA1Q13131 559 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 BARGINQ6ZT62 677 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 SPATA2Q9UM82 520 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 DAGLAQ9Y4D2 1042 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 PIPSLA2A3N6 862 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 H3BMM5 538 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 SMIM22K7EJ46 135 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 F9P00740 461 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 KPNA1P52294 538 aaPredicted RBP15.32■□□□□ 0.04
UBR5-201ENST00000220959 DDHD1Q8NEL9 900 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 VPS33AQ96AX1 596 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 ISCA1Q9BUE6 129 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 ATP6V1B2P21281 511 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 RASGRP2Q7LDG7 609 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 TRMT11Q7Z4G4 463 aaKnown RBP15.32■□□□□ 0.04
UBR5-201ENST00000220959 CCNJLQ8IV13 435 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 OR2W6PQ8NHA6 318 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 CELF4Q9BZC1 486 aaKnown RBP15.32■□□□□ 0.04
UBR5-201ENST00000220959 LRRC40Q9H9A6 602 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 VIPAS39Q9H9C1 493 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 HSMCR30P0CW71 290 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 MSH3P20585 1137 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 CUL2Q13617 745 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 CTXN3Q4LDR2 81 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 ATP6AP1LQ52LC2 224 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 TAF2Q6P1X5 1199 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 SLC30A9Q6PML9 568 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 ITIH5Q86UX2 942 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 TRPC4APQ8TEL6 797 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 PHF20Q9BVI0 1012 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 SERHL2Q9H4I8 314 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 C17orf75Q9HAS0 396 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 SERHLQ9NQF3 203 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 TBX20Q9UMR3 447 aa15.32■□□□□ 0.04
UBR5-201ENST00000220959 ALDH2P05091 517 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 R3HDM1Q15032 1099 aaKnown RBP15.31■□□□□ 0.04
UBR5-201ENST00000220959 RDM1Q8NG50 284 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 PPP1R10Q96QC0 940 aaKnown RBP15.31■□□□□ 0.04
UBR5-201ENST00000220959 SH3BP4Q9P0V3 963 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 NDOR1Q9UHB4 597 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 STAU1O95793 577 aaKnown RBP15.31■□□□□ 0.04
UBR5-201ENST00000220959 VHLP40337 213 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 RHOAP61586 193 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 DNAJC3Q13217 504 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 SLC25A24Q6NUK1 477 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 FAM136AQ96C01 138 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 STON1Q9Y6Q2 735 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 GLP2RO95838 553 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 GPRASP2Q96D09 838 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 OLFM1Q99784 485 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 GPRC5DQ9NZD1 345 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 A0A087X0T9 212 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 NUMBP49757 651 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 CCNI2Q6ZMN8 369 aaPredicted RBP15.31■□□□□ 0.04
UBR5-201ENST00000220959 REXO4Q9GZR2 422 aaKnown RBP15.31■□□□□ 0.04
UBR5-201ENST00000220959 FGFR2P21802 821 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 FOXO4P98177 505 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 SEL1L3Q68CR1 1132 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 BRINP3Q76B58 766 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 ADSSL1Q8N142 457 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 KIF2BQ8N4N8 673 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 THP07101 528 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 LSP1P33241 339 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 PEX5P50542 639 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 GTF2A2P52657 109 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 SLC29A2Q14542 456 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 C16orf86Q6ZW13 317 aa15.31■□□□□ 0.04
UBR5-201ENST00000220959 CD302Q8IX05 232 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms