RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LRRC1Q9BTT6 524 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 B4GALT5O43286 388 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 SETSIPP0DME0 302 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 GEMIN4P57678 1058 aaKnown RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 ACTN3Q08043 901 aaPredicted RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 ALS2CLQ60I27 953 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 TFB1MQ8WVM0 346 aaKnown RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 PPARGC1AQ9UBK2 798 aaKnown RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 ZNF189O75820 626 aaPredicted RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 PDHA1P08559 390 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 TYK2P29597 1187 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 GUCY1A3Q02108 690 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 EIF2B5Q13144 721 aaKnown RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 NT5DC3Q86UY8 548 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 LPCAT1Q8NF37 534 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 NXF3Q9H4D5 531 aaKnown RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 TUBP50607 506 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 KCNT1Q5JUK3 1230 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 PHLDB3Q6NSJ2 640 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 ZPBP2Q6X784 338 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 SH3BP5LQ7L8J4 393 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 ZNF677Q86XU0 584 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 NPAS4Q8IUM7 802 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 SERPINB11Q96P15 392 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 MARCOQ9UEW3 520 aaPredicted RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 DNMT3LQ9UJW3 386 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 PCDHGB4Q9UN71 923 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 RHOBTB1O94844 696 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 DUSP4Q13115 394 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 ART3Q13508 389 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 WHAMMQ8TF30 809 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 BCAP29Q9UHQ4 241 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 PRKAA1Q13131 559 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 TRMT11Q7Z4G4 463 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 DDX42Q86XP3 938 aaKnown RBP eCLIP14.24□□□□□ -0.13
SIX4-201ENST00000216513 PPP1R16AQ96I34 528 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 SHCBP1LQ9BZQ2 653 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 SUPT3HB4E1H0 165 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 NDUFB5O43674 189 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 CST8O60676 142 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 RAMP2O60895 175 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 SUPT3HO75486 399 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 PTPN1P18031 435 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 RFX3P48380 749 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 HNRNPH2P55795 449 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 FBXO46Q6PJ61 603 aaPredicted RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 SLC26A7Q8TE54 656 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 UVRAGQ9P2Y5 699 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 SFMBT1Q9UHJ3 866 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 AP3B1O00203 1094 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 IFRD1O00458 451 aaPredicted RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 IGSF6O95976 241 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 HIRAP54198 1017 aaPredicted RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 APBA1Q02410 837 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 SGO1Q5FBB7 561 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 IZUMO3Q5VZ72 239 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 EMC1Q8N766 993 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 CXorf40AQ8TE69 158 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 XAB2Q9HCS7 855 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 VCX3AQ9NNX9 186 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 LTBP3Q9NS15 1303 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 ADH1CP00326 375 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 MARSP56192 900 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 CCDC137Q6PK04 289 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 C11orf74Q86VG3 221 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 SUGP1Q8IWZ8 645 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 RAD18Q9NS91 495 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 NEDD8-MDP1E9PL57 170 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 TBL1XO60907 577 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 APODP05090 189 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 CDC25CP30307 473 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 VANGL2Q9ULK5 521 aa14.24□□□□□ -0.13
SIX4-201ENST00000216513 TDRKHQ9Y2W6 561 aaKnown RBP14.24□□□□□ -0.13
SIX4-201ENST00000216513 ZBTB22O15209 634 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 NFICP08651 508 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 SLC10A3P09131 477 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 LONRF1Q17RB8 773 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 AAK1Q2M2I8 961 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 TIGD7Q6NT04 549 aaPredicted RBP14.23□□□□□ -0.13
SIX4-201ENST00000216513 MARK2Q7KZI7 788 aaKnown RBP14.23□□□□□ -0.13
SIX4-201ENST00000216513 C6orf203Q9P0P8 240 aaPredicted RBP14.23□□□□□ -0.13
SIX4-201ENST00000216513 RNF14Q9UBS8 474 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 DIAPH2O60879 1101 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 FXR1P51114 621 aaKnown RBP eCLIP14.23□□□□□ -0.13
SIX4-201ENST00000216513 PTK7Q13308 1070 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 SCUBE3Q8IX30 993 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 MYLPFQ96A32 169 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 ZBTB10Q96DT7 871 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 PPP1R2P1Q96PQ5 205 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 SIGLEC1Q9BZZ2 1709 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 MEIS2O14770 477 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 RASIP1Q5U651 963 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 SV2AQ7L0J3 742 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 FAM167BQ9BTA0 163 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 MICAL2O94851 1124 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 PTGER2P43116 358 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 DAB2P98082 770 aa14.23□□□□□ -0.13
SIX4-201ENST00000216513 CAMK2GQ13555 558 aaPredicted RBP14.23□□□□□ -0.13
SIX4-201ENST00000216513 CAPSQ13938 189 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms