RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 C1QAP02745 245 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 HMGCS2P54868 508 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 YWHAEP62258 255 aaKnown RBP14.6□□□□□ -0.07
USH1C-201ENST00000005226 KCNJ11Q14654 390 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 TRNP1Q6NT89 227 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 C16orf46Q6P387 395 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 EEPD1Q7L9B9 569 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 SLC26A11Q86WA9 606 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 WDR49Q8IV35 697 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 NUDCD3Q8IVD9 361 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 UNC5BQ8IZJ1 945 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 CMASQ8NFW8 434 aaPredicted RBP14.6□□□□□ -0.07
USH1C-201ENST00000005226 TEPSINQ96N21 525 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 ZNF518BQ9C0D4 1074 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 XYLT2Q9H1B5 865 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 PLLPQ9Y342 182 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 CAPN14A8MX76 684 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 I3L4J1 428 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 MAFGO15525 162 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 AHCYL1O43865 530 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 LYPLA1O75608 230 aaPredicted RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 RFPL1O75677 317 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 APRTP07741 180 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 CSH1P0DML2 217 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 CSH2P0DML3 217 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 RBL1P28749 1068 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 CDH5P33151 784 aaPredicted RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 MAP3K10Q02779 954 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 TAZQ16635 292 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 C11orf91Q3C1V1 193 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 TTC39BQ5VTQ0 682 aaPredicted RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 PPP1R2P3Q6NXS1 205 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 SCYL2Q6P3W7 929 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 SCUBE1Q8IWY4 988 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 MPP5Q8N3R9 675 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 EFCAB3Q8N7B9 438 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 POU5F2Q8N7G0 328 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 USP6NLQ92738 828 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 PCYT2Q99447 389 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 SH3GL3Q99963 347 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 MAGEB5Q9BZ81 275 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 VCXQ9H320 206 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 PPM1HQ9ULR3 514 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 PCDHGC3Q9UN70 934 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 MAFBQ9Y5Q3 323 aaPredicted RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 B4GALT5O43286 388 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 MSCO60682 206 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 CSDE1O75534 798 aaKnown RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 RNF8O76064 485 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 ANPEPP15144 967 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 POLR2BP30876 1174 aaKnown RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 GMPRP36959 345 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 GRIA1P42261 906 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 FAM102AQ5T9C2 384 aaPredicted RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 IZUMO2Q6UXV1 221 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 SMYD3Q9H7B4 428 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 USP29Q9HBJ7 922 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 SLC7A8Q9UHI5 535 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 ZNF214Q9UL59 606 aaPredicted RBP14.59□□□□□ -0.07
USH1C-201ENST00000005226 MAD1L1Q9Y6D9 718 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 PCNTO95613 3336 aa14.59□□□□□ -0.07
USH1C-201ENST00000005226 HOXC6P09630 235 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 RXRBP28702 533 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 SLC25A3Q00325 362 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 CXCL9Q07325 125 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 FKBP1CQ5VVH2 108 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 CAND1Q86VP6 1230 aaKnown RBP14.58□□□□□ -0.07
USH1C-201ENST00000005226 ULK2Q8IYT8 1036 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 NDUFAF2Q8N183 169 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 GATA6Q92908 595 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 ZNF184Q99676 751 aaPredicted RBP14.58□□□□□ -0.07
USH1C-201ENST00000005226 APOL6Q9BWW8 343 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 PIH1D1Q9NWS0 290 aaKnown RBP14.58□□□□□ -0.07
USH1C-201ENST00000005226 EFR3BQ9Y2G0 817 aa14.58□□□□□ -0.07
USH1C-201ENST00000005226 KIF3CO14782 793 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 SNRPAP09012 282 aaKnown RBP14.58□□□□□ -0.08
USH1C-201ENST00000005226 C6orf222P0C671 652 aaPredicted RBP14.58□□□□□ -0.08
USH1C-201ENST00000005226 NBPF12Q5TAG4 269 aaPredicted RBP14.58□□□□□ -0.08
USH1C-201ENST00000005226 EEF1DP3Q658K8 133 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 XRRA1Q6P2D8 792 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 TMPRSS6Q8IU80 811 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 RNF149Q8NC42 400 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 GSTCDQ8NEC7 633 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 REPS2Q8NFH8 660 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.08
USH1C-201ENST00000005226 A0A1B0GVG6 124 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 E2F8A0AVK6 867 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 HMX2A2RU54 273 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 NDC80O14777 642 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 HMGCRP04035 888 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 NOMO1Q15155 1222 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 C1orf146Q5VVC0 180 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 CWF19L1Q69YN2 538 aaKnown RBP14.57□□□□□ -0.08
USH1C-201ENST00000005226 TRIM50Q86XT4 487 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 NETO2Q8NC67 525 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 HIPK4Q8NE63 616 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 IFT43Q96FT9 208 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 ADPGKQ9BRR6 497 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 ELOVL4Q9GZR5 314 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 POPDC2Q9HBU9 364 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms