RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SPOCD1Q6ZMY3 1216 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ARHGEF19Q8IW93 802 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 LZICQ8WZA0 190 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 PKD2L2Q9NZM6 624 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ASTN2O75129 1339 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 HSPA9P38646 679 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 LIG3P49916 1009 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 SLC6A3Q01959 620 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 WASHC5Q12768 1159 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 PTK7Q13308 1070 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 E2F4Q16254 413 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 WSCD1Q658N2 575 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 PPP1R13LQ8WUF5 828 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 C12orf42Q96LP6 360 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 HSD17B14Q9BPX1 270 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 BRD8Q9H0E9 1235 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 RNPEPQ9H4A4 650 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 POPDC2Q9HBU9 364 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 MLXIPLQ9NP71 852 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ASAH2Q9NR71 780 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 NDE1Q9NXR1 346 aa10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 TRMT6Q9UJA5 497 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 DRG1Q9Y295 367 aaKnown RBP10.72□□□□□ -0.69
NIPAL3-201ENST00000003912 ENDOD1O94919 500 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 TGM2P21980 687 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 GRM5P41594 1212 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 FBXW4P57775 412 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 KCNA10Q16322 511 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ERAP2Q6P179 960 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ABHD15Q6UXT9 468 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 SH3BP5LQ7L8J4 393 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 C18orf25Q96B23 403 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 THOC1Q96FV9 657 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ZFP69BQ9UJL9 534 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 FAM50BQ9Y247 325 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 RIPK3Q9Y572 518 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ATP5HO75947 161 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 LTFP02788 710 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 OR1E1P30953 314 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 EVX2Q03828 476 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ITGB3BPQ13352 177 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 MARC1Q5VT66 337 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 TTC39BQ5VTQ0 682 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 RMDN2Q96LZ7 410 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 NAT9Q9BTE0 207 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 APOL5Q9BWW9 433 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ACTR5Q9H9F9 607 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ATP13A1Q9HD20 1204 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 FAM105AQ9NUU6 356 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 TBC1D13Q9NVG8 400 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 TRAV19A0A0A6YYK7 116 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 FAM47DPA6NHR8 397 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 RAD51CO43502 376 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ASGR1P07306 291 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 MYL2P10916 166 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 CCDC130P13994 396 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 CYP2F1P24903 491 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ATP5C1P36542 298 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 OTUD4Q01804 1114 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 HIST2H2ACQ16777 129 aaPredicted RBP10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 HIST2H2AA3Q6FI13 130 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 GRAMD1AQ96CP6 724 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 ASPSCR1Q9BZE9 553 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 BTBD7Q9P203 1132 aa10.71□□□□□ -0.69
NIPAL3-201ENST00000003912 MOXD2PA6NHM9 499 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 CCDC22O60826 627 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 HAUS5O94927 633 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 JCHAINP01591 159 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 CSH1P0DML2 217 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 CSH2P0DML3 217 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 PSEN1P49768 467 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 TUBP50607 506 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 PDCLQ13371 301 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 PPIGQ13427 754 aaKnown RBP eCLIP10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 SPDYAQ5MJ70 313 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 TEX12Q9BXU0 123 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 NT5MQ9NPB1 228 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 HES2Q9Y543 173 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 AKAP12Q02952 1782 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 A0A087X0B3 334 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 TSPAN3O60637 253 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 ALDH1A2O94788 518 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 NFICP08651 508 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 ABCE1P61221 599 aaKnown RBP10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 LRIG3Q6UXM1 1119 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 IFNL1Q8IU54 200 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 DEFB106AQ8N104 65 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 TEKT4Q8WW24 435 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 SPATA17Q96L03 361 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 MFSD1Q9H3U5 465 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 DCTN4Q9UJW0 460 aa10.71□□□□□ -0.7
NIPAL3-201ENST00000003912 SDR42E2A6NKP2 422 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 PHF20L1A8MW92 1017 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 OPHN1O60890 802 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms