RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Pgm1Q9D0F9 562 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Cbx8Q9QXV1 362 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Fkbp1bQ9Z2I2 108 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Scn4aQ9ER60 1841 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Speer4eK7N6S8 255 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 HunkO88866 714 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Lig3P97386 1015 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Trub2Q91WG3 331 aaKnown RBP7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Rbm47Q91WT8 590 aaKnown RBP7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Sugt1Q9CX34 336 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 4930449I24RikQ9D5E3 319 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Atp5oQ9DB20 213 aaKnown RBP7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Rpl9-ps1S4R1R7 191 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Sec24cG3X972 1096 aaKnown RBP7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Dsg3O35902 993 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Stx7O70439 261 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 JchainP01592 159 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Cdo1P60334 200 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Neurl1bQ0MW30 546 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 SpoplQ2M2N2 392 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Ephx4Q6IE26 359 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Tmco6Q8BQX5 494 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Uroc1Q8VC12 676 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Socs4Q91ZA6 436 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Tjp2Q9Z0U1 1167 aaKnown RBP7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Ankrd31A0A140LI88 1765 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Serpinb2P12388 415 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Mcm9Q2KHI9 1134 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 LbrQ3U9G9 626 aaKnown RBP7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Ankrd34bQ3UUF8 508 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 P2rx5Q3UYI1 455 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 WhammQ571B6 793 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Acbd5Q5XG73 508 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Dna2Q6ZQJ5 1062 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Zfp418Q8BFS8 652 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Pomgnt2Q8BW41 605 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Teddm1bQ8CC62 306 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Pcdhb19Q91Y01 801 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Rhobtb1Q9DAK3 695 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Tcp11x2A2AEI7 503 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Pdzd8B9EJ80 1147 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 ThraP63058 492 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 S100a13P97352 98 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 SPINDOCQ05AH6 381 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Tcaf3Q6QR59 914 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 MypopQ8R4U1 393 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 CarfQ8VHI4 689 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Pgam1Q9DBJ1 254 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Large1Q9Z1M7 756 aa7.5□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Hoxa2P31245 372 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Gtf2bP62915 316 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Tpd52Q62393 224 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Ugt1a1Q63886 535 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Lilrb4Q64281 335 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Chsy1Q6ZQ11 800 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Them6Q80ZW2 207 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Ythdf3Q8BYK6 585 aaKnown RBP7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Cox18Q8VC74 331 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Mrpl1Q99N96 336 aaKnown RBP7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Skint3A7TZF0 458 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 A630010A05RikA9C473 232 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 SftpbP50405 377 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 HmgcrQ01237 887 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Arnt2Q61324 712 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 VwdeQ6DFV8 926 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Abcg2Q7TMS5 657 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Mapre2Q8R001 326 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Kdm4bQ91VY5 1086 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Psmd12Q9D8W5 456 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Chmp2aQ9DB34 222 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Katna1Q9WV86 491 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Wdr49A0A0N4SUK7 710 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 TriqkB2B9E1 86 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 2610008E11RikG3X964 669 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Cd247P24161 164 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Man1a1P45700 655 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 BC048507Q80ZS7 89 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Trim31Q8R0K2 507 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Far1Q922J9 515 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Yaf2Q99LW6 179 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Gm28036V9GXJ1 658 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Scgb2b11A0A087WR49 112 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Gm2832F7AEC7 200 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 XntrpcF8VQM8 1264 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Mup13L7N222 235 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Pou5f1P20263 352 aaKnown RBP7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 BrafP28028 804 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Gfpt1P47856 697 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Ddx3xQ62167 662 aaKnown RBP7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Exoc3l4Q6DIA2 721 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 DstykQ6XUX1 927 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Arhgap26Q6ZQ82 814 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Krr1Q8BGA5 380 aaKnown RBP7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Fbxo38Q8BMI0 1194 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 AgpsQ8C0I1 645 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Acad9Q8JZN5 625 aaKnown RBP7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 OtoaQ8K561 1137 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Vmn1r203Q8R273 311 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Epn3Q91W69 636 aa7.49□□□□□ -1.21
Scn3a-201ENSMUST00000066432 Cog2Q921L5 731 aa7.49□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms