RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Wwp1Q8BZZ3 918 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Q8K2W9 541 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ophn1Q99J31 802 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gdpd3Q99LY2 330 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gimap3Q99MI6 301 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kctd4Q9D7X1 259 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Prmt1Q9JIF0 371 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pkp3Q9QY23 797 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zfp607bG3X9H3 648 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 RngttO55236 597 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 EpoP07321 192 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Psma2P49722 234 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sesn2P58043 480 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Scand1Q2M4I6 142 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Grik5Q61626 979 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dlg4Q62108 724 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tas2r104Q7M723 302 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Impg2Q80XH2 1243 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 4932414N04RikQ8CEQ9 752 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nat10Q8K224 1024 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Clptm1Q8VBZ3 664 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Grhl1Q921D9 618 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Upk3bl1Q9D701 249 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nusap1Q9ERH4 427 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ddx39bQ9Z1N5 428 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cd93O89103 644 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Fabp1P12710 127 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PrkcaP20444 672 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gna13P27601 377 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sox18P43680 377 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Arl4cP61208 192 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Serinc4Q5XK03 492 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mxd4Q60948 209 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tspan7Q62283 249 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Krt77Q6IFZ6 572 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr792Q7TRH9 311 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kcnf1Q7TSH7 493 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mfn1Q811U4 741 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Arhgap28Q8BN58 729 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Fgfr1op2Q9CRA9 253 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Bcs1lQ9CZP5 418 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cbx6Q9DBY5 414 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Plod2Q9R0B9 737 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm35911A0A1D5RLS7 214 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Unc13dB2RUP2 1085 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm8994E9PV04 411 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm8247F6VRJ8 213 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm8212F6ZMY5 213 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm8138F7BY56 213 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm8232F7CFJ3 213 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cfap73J3QPZ5 306 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm7970L7N271 213 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm8122L7N2C7 213 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm7980L7N471 213 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PdgfaP20033 211 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nos2P29477 1144 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Acsl1P41216 699 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Atp2b3Q0VF55 1220 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zbtb48Q1H9T6 681 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nell1Q2VWQ2 810 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sik1Q60670 779 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rexo4Q6PAQ4 432 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 R3hdm2Q80TM6 1044 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Catsper3Q80W99 395 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc30a5Q8R4H9 761 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sucnr1Q99MT6 317 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 QpctQ9CYK2 362 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Lmbr1lQ9D1E5 489 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Trpc5Q9QX29 975 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm13089A2AGW7 455 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm6685D3YYP3 228 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm17093F6XGJ4 214 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 InvsO89019 1062 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PlatP11214 559 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ptx3P48759 381 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 NfibP97863 570 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 LyarQ08288 388 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tdpoz2Q717B2 364 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sult1c1Q80VR3 304 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slitrk5Q810B7 957 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nrip1Q8CBD1 1161 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tram1l1Q8QZR0 363 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Chid1Q922Q9 393 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Glod4Q9CPV4 298 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 RhouQ9EQT3 261 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Chrna6Q9R0W9 494 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ktn1Q61595 1327 aaKnown RBP9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Skint6A7XUZ6 1240 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mllt6B1AR10 1109 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 XntrpcF8VQM8 1264 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ptch2O35595 1182 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Orc4O88708 433 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Abcb1aP21447 1276 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Il12bP43432 335 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PrkacbP68181 351 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 TCAIMQ66JZ4 499 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Clvs2Q8BG92 327 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Prr33Q8C494 260 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dnajc28Q8VCE1 385 aa9.25□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dhcr24Q8VCH6 516 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms