RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ighv11-2A0A075B5R8 117 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm1141B9EJU1 475 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 TpteG5E8H5 664 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Anxa8O35640 327 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Lsp1P19973 330 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Aldh1a1P24549 501 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 PdgfraP26618 1089 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Serpind1P49182 478 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ppm1jQ149T7 507 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Adad1Q5SUE7 619 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Acbd5Q5XG73 508 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 SnrpaQ62189 287 aaKnown RBP12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mtmr10Q7TPM9 771 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Lyve1Q8BHC0 318 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Palm2Q8BR92 376 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Afap1l1Q8BZI0 768 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ttc22Q8C159 568 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 F11Q91Y47 624 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Cdk9Q99J95 372 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Slc39a3Q99K24 317 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rwdd4Q9CPR1 188 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tssk3Q9D2E1 268 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rin2Q9D684 903 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Cyp2c55Q9D816 490 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tcirg1Q9JHF5 834 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Myh4Q5SX39 1939 aa12.3□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Zfp990B1AVN5 605 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm4302E9PX25 294 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dpysl3Q62188 570 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Stk40Q7TNL3 435 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Nlrp4aQ8BU40 982 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 EcsitQ9QZH6 435 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Yme1l1O88967 715 aaKnown RBP12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 KitP05532 979 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Olfr1057Q7TR75 315 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Mrpl9Q99N94 265 aaKnown RBP12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 LrmdaQ9D9B4 229 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Actl7aQ9QY84 440 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Prrg1A2BFE8 218 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Apold1E9Q0X2 246 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tnfrsf11bO08712 401 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rag1P15919 1040 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Usp4P35123 962 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Kcnj2P35561 428 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Arf4P61750 180 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Smyd5Q3TYX3 416 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Zfp956Q3UZY6 572 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm5414Q6IFZ8 552 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ttc39bQ8BYY4 617 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dis3lQ8C0S1 1053 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 IntS13Q8QZV7 732 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Nup85Q8R480 656 aaKnown RBP12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tesk2Q8VCT9 570 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Snrnp25Q8VIK1 123 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Stau1Q9Z108 487 aaKnown RBP12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm29554A0A087WNW4 188 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 1700064H15RikD3Z4D4 81 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 PolP11369 1281 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 YwhaqP68254 245 aaKnown RBP12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Spag6Q3V0U9 509 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gcnt3Q5JCT0 437 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Sema3cQ62181 751 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Zfp398Q8BV16 643 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Sntg2Q925E0 539 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Sugt1Q9CX34 336 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Chit1Q9D7Q1 464 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Slfn2Q9Z0I6 378 aa12.29□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gm8369E9PZI3 166 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Vmn2r19G5E8G4 854 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 ChrngP04760 519 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 TankP70347 448 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Itga4Q00651 1039 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 RhocQ62159 193 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Map3k10Q66L42 940 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 SnphQ80U23 495 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Disc1Q811T9 852 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tlk1Q8C0V0 766 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 P3h2Q8CG71 703 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Top3aO70157 1003 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Casp8O89110 480 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Dpep1P31428 410 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Phactr1Q2M3X8 580 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Tmem120bQ3TA38 339 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Vps51Q3UVL4 782 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Olfr1353Q8VGU8 309 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ten1Q9D7K2 161 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Gpr63Q9EQQ3 425 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fgfr2P21803 821 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 NficP70255 439 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Rplp2P99027 115 aaKnown RBP12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 VcpQ01853 806 aaKnown RBP12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fads2p1Q0VAX3 487 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 CenpuQ8C4M7 410 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Fcho1Q8K285 873 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Defb19Q8K3I8 83 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Ola1Q9CZ30 396 aaKnown RBP12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pkp3Q9QY23 797 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 Pld1Q9Z280 1074 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 FpgsP48760 587 aa12.28□□□□□ -0.44
Pcif1-201ENSMUST00000041643 4930502E18RikQ14BQ3 236 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms