RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Tle2Q9WVB2 767 aa11.04□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Unc13dB2RUP2 1085 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Smok3aC0HKC8 504 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Smok3bC0HKC9 504 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 SftpdP50404 374 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Slc1a1P51906 523 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Uchl4P58321 233 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Q3KNL4 93 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 9930111J21Rik1Q5SVP0 844 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tdpoz2Q717B2 364 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ccdc134Q8C7V8 229 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Micu1Q8VCX5 477 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Olfr1361Q8VFH0 317 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Serpina3nQ91WP6 418 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Xpo5Q924C1 1204 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Unc45aQ99KD5 944 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Hnrnpa0Q9CX86 305 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Dmap1Q9JI44 468 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Thap11Q9JJD0 305 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Med20Q9R0X0 212 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Slfn1Q9Z0I7 337 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Nup98Q6PFD9 1816 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Myh3P13541 1940 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Grik3B1AS29 919 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Mroh4G3X8W1 983 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Pole2O54956 527 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Soat2O88908 525 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tmprss15P97435 1069 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Grin2cQ01098 1239 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Cd36Q08857 472 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Grm2Q14BI2 872 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Arhgap17Q3UIA2 846 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Esyt3Q5DTI8 891 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Armc5Q5EBP3 926 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Tcf4Q60722 670 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ugt1a1Q63886 535 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Parp6Q6P6P7 630 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 SmapQ9R0P4 181 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ascc3E9PZJ8 2198 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Zscan4bE9Q3G0 505 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Nek2O35942 443 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gcnt1Q09324 428 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 G2e3Q5RJY2 716 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Scube1Q6NZL8 1018 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 RfflQ6ZQM0 377 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Olfr1505Q7TQQ2 316 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Eif4bQ8BGD9 611 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 AgpsQ8C0I1 645 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Bhlhe22Q8C6A8 355 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 GaleQ8R059 347 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Vmn1r199Q8R280 367 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Epm2aip1Q8VEH5 606 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Socs7Q8VHQ2 579 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Dctn2Q99KJ8 402 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 PodxlQ9R0M4 503 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ccdc85cE9Q6B2 420 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gm44G3UW88 330 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Hps1O08983 704 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Smyd1P97443 490 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 rp9P97762 213 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ppm1jQ149T7 507 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Zfp217Q3U0X6 1041 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Nxpe4Q52KP5 543 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Bnip1Q6QD59 228 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ankrd45Q810N6 248 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Mical2Q8BML1 960 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 GancQ8BVW0 898 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 ClmnQ8C5W0 1052 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Slc47a1Q8K0H1 567 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Hacd3Q8K2C9 362 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Ssh3Q8K330 649 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Nup85Q8R480 656 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 CpzQ8R4V4 654 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Klrb1fQ8VD98 217 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Chchd6Q91VN4 273 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Atp5c1Q91VR2 298 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Dok4Q99KE3 325 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 NvlQ9DBY8 855 aaKnown RBP11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Racgap1Q9WVM1 628 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Vmn2r25W4VSP2 855 aa11.03□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Col11a2Q64739 1736 aa11.02□□□□□ -0.64
Rnf40-201ENSMUST00000033088 Gm3752A6NAT4 150 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 CnpP16330 420 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Impdh2P24547 514 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Psmb9P28076 219 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ndufs6P52503 116 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Plk2P53351 682 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Mif4gdQ3UBZ5 222 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Pde1aQ61481 565 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Exd1Q8CDF7 570 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Katnal2Q9D3R6 539 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Mzb1Q9D8I1 188 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tcirg1Q9JHF5 834 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Adgra3Q7TT36 1310 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ankfn1A0A140LIW7 1083 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ssxb9A2BI93 185 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Prl6a1O35257 230 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Cyp2b9P12790 491 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Znf112Q0VAW7 879 aa11.02□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rnf113a2Q14B01 337 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms