RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 InhbaQ04998 424 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 InscQ3HNM7 579 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Fndc3bQ6NWW9 1207 aaKnown RBP17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Gucy2gQ6TL19 1100 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Fam102aQ78T81 392 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 SowahcQ8C0J6 512 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Abhd8Q8R0P8 439 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Dis3Q9CSH3 958 aaKnown RBP17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Gbp2Q9Z0E6 589 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Cd97Q9Z0M6 818 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Zfc3h1B2RT41 1992 aaKnown RBP17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 0610012G03RikA0A0J9YTR2 95 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Abcb5B5X0E4 1255 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Farp1F8VPU2 1048 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Nek2O35942 443 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Gnat1P20612 350 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 M6prP24668 278 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Snx27Q3UHD6 539 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Adamts2Q8C9W3 1213 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Tp53inp2Q8CFU8 221 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Smyd2Q8R5A0 433 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Pcdhb1Q91Y08 818 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Adi1Q99JT9 179 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Gins2Q9D600 185 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Scyl3Q9DBQ7 735 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Tsc1Q9EP53 1161 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Bace2Q9JL18 514 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 MycsQ9Z304 431 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Gm7086A0A1W2P766 342 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Cyp2t4E9PWV0 503 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Per2O54943 1257 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Chrna1P04756 457 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 StamP70297 548 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Olfm4Q3UZZ4 505 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Syn2Q64332 586 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Rbl2Q64700 1135 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Map1sQ8C052 973 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 AslQ91YI0 464 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Tm9sf1Q9DBU0 606 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Plscr2Q9DCW2 307 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 GmprQ9DCZ1 345 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Hic1Q9R1Y5 733 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Speer3W4VSP1 261 aa17.06■□□□□ 0.32
Shh-201ENSMUST00000002708 Vmn2r103E9PWW0 856 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Cdh16O88338 830 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Magea6O89010 325 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 DmpkP54265 631 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Zc3h15Q3TIV5 426 aaKnown RBP17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Smcr8Q3UMB5 935 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Tll1Q62381 1013 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Ptk6Q64434 451 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Atg9bQ6EBV9 922 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Zfp454Q80Y34 536 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Ppp1r12bQ8BG95 976 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 GlmnQ8BZM1 596 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 PdgfcQ8CI19 345 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Lin7aQ8JZS0 233 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Rtfdc1Q99K95 307 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Rilpl2Q99LE1 197 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Bbs5Q9CZQ9 341 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 DcpsQ9DAR7 338 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Spock2Q9ER58 423 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Pck1Q9Z2V4 622 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Olfr1305A2AVW3 312 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Gm379J3QQ19 296 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 FlgP11088 336 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 TdgP56581 421 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Rab6bP61294 208 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Itm2aQ61500 263 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Rhpn2Q8BWR8 686 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Wdr27Q8C5V5 780 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Ccdc28bQ8CEG5 200 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Lonp1Q8CGK3 949 aaKnown RBP17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Kat14Q8CID0 779 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Tgif2lx2Q8K5B9 231 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Akr1c14Q91WT7 323 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Wbp11Q923D5 641 aaKnown RBP17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Dpp3Q99KK7 738 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Zfyve19Q9DAZ9 389 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Akt3Q9WUA6 479 aa17.05■□□□□ 0.32
Shh-201ENSMUST00000002708 Gm29554A0A087WNW4 188 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Smim10l2aA0A0B4J1F8 78 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 4931406B18RikA2RSL7 367 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Vmn2r59E9PUT5 865 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Apol11aE9PZG0 334 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Pnpla5Q32LZ8 432 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Hace1Q3U0D9 909 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Psg28Q4KL66 472 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Znf185Q62394 352 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Rab34Q64008 259 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Ppme1Q8BVQ5 386 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Rfx6Q8C7R7 927 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Zfp263Q8CF60 680 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Actrt1Q9D9J3 376 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 CitP49025 2055 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Celf5D3Z4T1 395 aaKnown RBP17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Lilra5D3Z7A9 295 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Svs3aF2Z472 265 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Fam71e2L7N480 754 aa17.04■□□□□ 0.32
Shh-201ENSMUST00000002708 Pgk1P09411 417 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms