RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
CASC19-260ENST00000641828 COL17A1Q9UMD9 1497 aaPredicted RBP8.2□□□□□ -1.1
CASC19-260ENST00000641828 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
CASC19-260ENST00000641828 NECTIN2Q92692 538 aa8.2□□□□□ -1.1
CASC19-260ENST00000641828 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
CASC19-260ENST00000641828 ADAMTS12P58397 1594 aa8.2□□□□□ -1.1
CASC19-260ENST00000641828 ABCA5Q8WWZ7 1642 aa8.2□□□□□ -1.1
CASC19-260ENST00000641828 ADAM33Q9BZ11 813 aa8.19□□□□□ -1.1
CASC19-260ENST00000641828 ZNF330Q9Y3S2 320 aaPredicted RBP8.19□□□□□ -1.1
CASC19-260ENST00000641828 RIC3Q7Z5B4 369 aa8.19□□□□□ -1.1
CASC19-260ENST00000641828 SPIRE2Q8WWL2 714 aa8.19□□□□□ -1.1
CASC19-260ENST00000641828 PCF11O94913 1555 aaKnown RBP8.18□□□□□ -1.1
CASC19-260ENST00000641828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.18□□□□□ -1.1
CASC19-260ENST00000641828 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
CASC19-260ENST00000641828 GLI2P10070 1586 aa8.17□□□□□ -1.1
CASC19-260ENST00000641828 MTMR14Q8NCE2 650 aa8.17□□□□□ -1.1
CASC19-260ENST00000641828 KIF21BO75037 1637 aa8.17□□□□□ -1.1
CASC19-260ENST00000641828 CUX1P39880 1505 aa8.16□□□□□ -1.1
CASC19-260ENST00000641828 TEX14Q8IWB6 1497 aa8.16□□□□□ -1.1
CASC19-260ENST00000641828 RCCD1A6NED2 376 aa8.16□□□□□ -1.1
CASC19-260ENST00000641828 NUDT7P0C024 238 aa8.16□□□□□ -1.1
CASC19-260ENST00000641828 CD46P15529 392 aa8.16□□□□□ -1.1
CASC19-260ENST00000641828 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
CASC19-260ENST00000641828 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
CASC19-260ENST00000641828 CDK11AQ9UQ88 783 aaPredicted RBP8.16□□□□□ -1.1
CASC19-260ENST00000641828 CCDC9Q9Y3X0 531 aaKnown RBP8.15□□□□□ -1.1
CASC19-260ENST00000641828 PTPRMP28827 1452 aa8.15□□□□□ -1.1
CASC19-260ENST00000641828 SPTLC1O15269 473 aa8.15□□□□□ -1.11
CASC19-260ENST00000641828 GDPD2Q9HCC8 539 aa8.15□□□□□ -1.11
CASC19-260ENST00000641828 EEA1Q15075 1411 aa8.15□□□□□ -1.11
CASC19-260ENST00000641828 RSBN1LQ6PCB5 846 aaPredicted RBP8.14□□□□□ -1.11
CASC19-260ENST00000641828 UBE2Q2Q8WVN8 375 aa8.14□□□□□ -1.11
CASC19-260ENST00000641828 EYA1Q99502 592 aa8.14□□□□□ -1.11
CASC19-260ENST00000641828 FAM198AQ9UFP1 575 aa8.14□□□□□ -1.11
CASC19-260ENST00000641828 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 SULF1Q8IWU6 871 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 KHSRPQ92945 711 aaKnown RBP eCLIP8.13□□□□□ -1.112e-6■□□□□ 9.6
CASC19-260ENST00000641828 FHAD1B1AJZ9 1412 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 ABCA10Q8WWZ4 1543 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 PLB1Q6P1J6 1458 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 ASXL2Q76L83 1435 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 WWC1Q8IX03 1113 aa8.13□□□□□ -1.11
CASC19-260ENST00000641828 ITGAEP38570 1179 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 HSPA2P54652 639 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 ARSIQ5FYB1 569 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 MAP3K4Q9Y6R4 1608 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 DHX57Q6P158 1386 aaKnown RBP8.12□□□□□ -1.11
CASC19-260ENST00000641828 MOXD2PA6NHM9 499 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 DDX11L8A8MPP1 907 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 POTEIP0CG38 1075 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
CASC19-260ENST00000641828 COL9A1P20849 921 aa8.11□□□□□ -1.11
CASC19-260ENST00000641828 QPCTQ16769 361 aa8.11□□□□□ -1.11
CASC19-260ENST00000641828 PRM3Q9NNZ6 103 aa8.11□□□□□ -1.11
CASC19-260ENST00000641828 CUL7Q14999 1698 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 DNAJB2P25686 324 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 GJA5P36382 358 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 ABL2P42684 1182 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 DOK7Q18PE1 504 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 RETREG2Q8NC44 543 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 TSKSQ9UJT2 592 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 ADAMTSL3P82987 1691 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 LILRB3O75022 631 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 NUDT18Q6ZVK8 323 aa8.1□□□□□ -1.11
CASC19-260ENST00000641828 SALL2Q9Y467 1007 aaPredicted RBP8.1□□□□□ -1.11
CASC19-260ENST00000641828 CCER2I3L3R5 266 aa8.09□□□□□ -1.11
CASC19-260ENST00000641828 AP1G2O75843 785 aa8.09□□□□□ -1.11
CASC19-260ENST00000641828 NDUFV2P19404 249 aa8.09□□□□□ -1.11
CASC19-260ENST00000641828 CALR3Q96L12 384 aaKnown RBP8.09□□□□□ -1.11
CASC19-260ENST00000641828 TBC1D2BQ9UPU7 963 aa8.09□□□□□ -1.11
CASC19-260ENST00000641828 GOLGA3Q08378 1498 aa8.09□□□□□ -1.11
CASC19-260ENST00000641828 RUSC2Q8N2Y8 1516 aa8.09□□□□□ -1.12
CASC19-260ENST00000641828 ZSWIM6Q9HCJ5 1215 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 PCDHB15Q9Y5E8 787 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 C3orf80F5H4A9 247 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 HOXB3P14651 431 aaPredicted RBP8.08□□□□□ -1.12
CASC19-260ENST00000641828 PPP4R3BQ5MIZ7 849 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 TMEM134Q9H6X4 195 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
CASC19-260ENST00000641828 POM121CA8CG34 1229 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 PPP1R3GB7ZBB8 358 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 RTL5Q5HYW3 569 aaPredicted RBP8.07□□□□□ -1.12
CASC19-260ENST00000641828 GLMNQ92990 594 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 BCL2L12Q9HB09 334 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 LHX6Q9UPM6 363 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 KIAA0586Q9BVV6 1533 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
CASC19-260ENST00000641828 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
CASC19-260ENST00000641828 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 NUTM2DQ5VT03 806 aaPredicted RBP8.07□□□□□ -1.12
CASC19-260ENST00000641828 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
CASC19-260ENST00000641828 ZNF710Q8N1W2 664 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
CASC19-260ENST00000641828 EPRSP07814 1512 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms