RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
PHGDH-219ENST00000641513 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
PHGDH-219ENST00000641513 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
PHGDH-219ENST00000641513 DIP2AQ14689 1571 aa12.02□□□□□ -0.49
PHGDH-219ENST00000641513 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
PHGDH-219ENST00000641513 RALBP1Q15311 655 aa12.02□□□□□ -0.49
PHGDH-219ENST00000641513 SLC26A8Q96RN1 970 aa12.02□□□□□ -0.49
PHGDH-219ENST00000641513 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
PHGDH-219ENST00000641513 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
PHGDH-219ENST00000641513 CPS1P31327 1500 aa12.01□□□□□ -0.49
PHGDH-219ENST00000641513 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-219ENST00000641513 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
PHGDH-219ENST00000641513 WAPLQ7Z5K2 1190 aa12.01□□□□□ -0.49
PHGDH-219ENST00000641513 ABCC11Q96J66 1382 aa12.01□□□□□ -0.49
PHGDH-219ENST00000641513 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
PHGDH-219ENST00000641513 PLEKHH1Q9ULM0 1364 aa12□□□□□ -0.49
PHGDH-219ENST00000641513 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
PHGDH-219ENST00000641513 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
PHGDH-219ENST00000641513 ITSN1Q15811 1721 aa11.99□□□□□ -0.49
PHGDH-219ENST00000641513 CHD2O14647 1828 aaKnown RBP11.98□□□□□ -0.49
PHGDH-219ENST00000641513 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
PHGDH-219ENST00000641513 SLC12A5Q9H2X9 1139 aa11.98□□□□□ -0.49
PHGDH-219ENST00000641513 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
PHGDH-219ENST00000641513 MED14O60244 1454 aa11.97□□□□□ -0.49
PHGDH-219ENST00000641513 TECPR2O15040 1411 aa11.97□□□□□ -0.49
PHGDH-219ENST00000641513 FAM135BQ49AJ0 1406 aa11.97□□□□□ -0.49
PHGDH-219ENST00000641513 ATAD2Q6PL18 1390 aa11.97□□□□□ -0.49
PHGDH-219ENST00000641513 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
PHGDH-219ENST00000641513 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
PHGDH-219ENST00000641513 TBX22Q9Y458 520 aa11.97□□□□□ -0.49
PHGDH-219ENST00000641513 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-219ENST00000641513 NSD3Q9BZ95 1437 aa11.96□□□□□ -0.49
PHGDH-219ENST00000641513 ADRA2BP18089 450 aa11.96□□□□□ -0.49
PHGDH-219ENST00000641513 SUPT16HQ9Y5B9 1047 aaKnown RBP11.96□□□□□ -0.49
PHGDH-219ENST00000641513 XRN1Q8IZH2 1706 aaKnown RBP11.96□□□□□ -0.49
PHGDH-219ENST00000641513 USP32Q8NFA0 1604 aa11.96□□□□□ -0.5
PHGDH-219ENST00000641513 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-219ENST00000641513 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
PHGDH-219ENST00000641513 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
PHGDH-219ENST00000641513 AMOTL2Q9Y2J4 779 aa11.95□□□□□ -0.5
PHGDH-219ENST00000641513 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
PHGDH-219ENST00000641513 PTPRUQ92729 1446 aa11.94□□□□□ -0.5
PHGDH-219ENST00000641513 BRD4O60885 1362 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-219ENST00000641513 ROBO2Q9HCK4 1378 aa11.94□□□□□ -0.5
PHGDH-219ENST00000641513 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
PHGDH-219ENST00000641513 HNRNPUQ00839 825 aaKnown RBP eCLIP11.94□□□□□ -0.5
PHGDH-219ENST00000641513 AMER1Q5JTC6 1135 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-219ENST00000641513 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
PHGDH-219ENST00000641513 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
PHGDH-219ENST00000641513 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
PHGDH-219ENST00000641513 ANKRD36BQ8N2N9 1353 aa11.93□□□□□ -0.5
PHGDH-219ENST00000641513 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-219ENST00000641513 HDGFL2Q7Z4V5 671 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-219ENST00000641513 TERF2IPQ9NYB0 399 aa11.93□□□□□ -0.5
PHGDH-219ENST00000641513 ADGRB2O60241 1585 aa11.92□□□□□ -0.5
PHGDH-219ENST00000641513 NPHP4O75161 1426 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-219ENST00000641513 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
PHGDH-219ENST00000641513 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
PHGDH-219ENST00000641513 A0A1W2PP64 1363 aa11.91□□□□□ -0.5
PHGDH-219ENST00000641513 CGNL1Q0VF96 1302 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 PPP2R1AP30153 589 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 MON2Q7Z3U7 1717 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 MORC1Q86VD1 984 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 FBXO41Q8TF61 875 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 TOPAZ1Q8N9V7 1692 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
PHGDH-219ENST00000641513 NALCNQ8IZF0 1738 aa11.89□□□□□ -0.51
PHGDH-219ENST00000641513 ILDR2Q71H61 639 aa11.89□□□□□ -0.51
PHGDH-219ENST00000641513 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
PHGDH-219ENST00000641513 ATP7BP35670 1465 aa11.89□□□□□ -0.51
PHGDH-219ENST00000641513 SOCS7O14512 581 aa11.88□□□□□ -0.51
PHGDH-219ENST00000641513 KCNA6P17658 529 aa11.88□□□□□ -0.51
PHGDH-219ENST00000641513 TNNT2P45379 298 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-219ENST00000641513 FMN2Q9NZ56 1722 aa11.88□□□□□ -0.51
PHGDH-219ENST00000641513 CDC42BPGQ6DT37 1551 aa11.88□□□□□ -0.51
PHGDH-219ENST00000641513 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
PHGDH-219ENST00000641513 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
PHGDH-219ENST00000641513 CD163L1Q9NR16 1453 aa11.87□□□□□ -0.51
PHGDH-219ENST00000641513 MAP2P11137 1827 aaKnown RBP11.86□□□□□ -0.51
PHGDH-219ENST00000641513 NSD2O96028 1365 aa11.86□□□□□ -0.51
PHGDH-219ENST00000641513 WDR43Q15061 677 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHGDH-219ENST00000641513 ERICH6BQ5W0A0 696 aa11.85□□□□□ -0.51
PHGDH-219ENST00000641513 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
PHGDH-219ENST00000641513 HSPA2P54652 639 aa11.84□□□□□ -0.51
PHGDH-219ENST00000641513 C14orf37Q86TY3 774 aa11.84□□□□□ -0.51
PHGDH-219ENST00000641513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
PHGDH-219ENST00000641513 GGNBP2Q9H3C7 697 aa11.84□□□□□ -0.51
PHGDH-219ENST00000641513 PRR36Q9H6K5 1346 aa11.84□□□□□ -0.51
PHGDH-219ENST00000641513 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
PHGDH-219ENST00000641513 NEFLP07196 543 aa11.83□□□□□ -0.52
PHGDH-219ENST00000641513 NWD1Q149M9 1564 aa11.83□□□□□ -0.52
PHGDH-219ENST00000641513 RBM33Q96EV2 1170 aaKnown RBP11.82□□□□□ -0.52
PHGDH-219ENST00000641513 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
PHGDH-219ENST00000641513 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
PHGDH-219ENST00000641513 EDC4Q6P2E9 1401 aaKnown RBP11.81□□□□□ -0.52
PHGDH-219ENST00000641513 SHPRHQ149N8 1683 aa11.81□□□□□ -0.52
PHGDH-219ENST00000641513 NRKQ7Z2Y5 1582 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms