RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
PHGDH-216ENST00000641375 ADAMTSL3P82987 1691 aa22.19■■□□□ 1.14
PHGDH-216ENST00000641375 THEMISQ8N1K5 641 aaPredicted RBP22.18■■□□□ 1.14
PHGDH-216ENST00000641375 BCANQ96GW7 911 aa22.18■■□□□ 1.14
PHGDH-216ENST00000641375 METP08581 1390 aa22.18■■□□□ 1.14
PHGDH-216ENST00000641375 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
PHGDH-216ENST00000641375 SLC12A5Q9H2X9 1139 aa22.18■■□□□ 1.14
PHGDH-216ENST00000641375 ATAD2Q6PL18 1390 aa22.17■■□□□ 1.14
PHGDH-216ENST00000641375 CARD14Q9BXL6 1004 aa22.17■■□□□ 1.14
PHGDH-216ENST00000641375 ZBED9Q6R2W3 1325 aa22.17■■□□□ 1.14
PHGDH-216ENST00000641375 TXNDC2Q86VQ3 553 aa22.16■■□□□ 1.14
PHGDH-216ENST00000641375 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-216ENST00000641375 USP32Q8NFA0 1604 aa22.16■■□□□ 1.14
PHGDH-216ENST00000641375 TECPR2O15040 1411 aa22.16■■□□□ 1.14
PHGDH-216ENST00000641375 SRPK2P78362 688 aaKnown RBP22.16■■□□□ 1.14
PHGDH-216ENST00000641375 LTKP29376 864 aa22.15■■□□□ 1.14
PHGDH-216ENST00000641375 SIRT1Q96EB6 747 aa22.15■■□□□ 1.14
PHGDH-216ENST00000641375 CABP2Q9NPB3 220 aa22.15■■□□□ 1.14
PHGDH-216ENST00000641375 ANKRD36BQ8N2N9 1353 aa22.15■■□□□ 1.14
PHGDH-216ENST00000641375 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.14
PHGDH-216ENST00000641375 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.14
PHGDH-216ENST00000641375 NSD3Q9BZ95 1437 aa22.13■■□□□ 1.13
PHGDH-216ENST00000641375 CPS1P31327 1500 aa22.13■■□□□ 1.13
PHGDH-216ENST00000641375 CEP170BQ9Y4F5 1589 aaPredicted RBP22.13■■□□□ 1.13
PHGDH-216ENST00000641375 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
PHGDH-216ENST00000641375 MED14O60244 1454 aa22.11■■□□□ 1.13
PHGDH-216ENST00000641375 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
PHGDH-216ENST00000641375 INSRP06213 1382 aa22.1■■□□□ 1.13
PHGDH-216ENST00000641375 CDK19Q9BWU1 502 aa22.09■■□□□ 1.13
PHGDH-216ENST00000641375 PLEKHH1Q9ULM0 1364 aa22.09■■□□□ 1.13
PHGDH-216ENST00000641375 CGNL1Q0VF96 1302 aa22.09■■□□□ 1.13
PHGDH-216ENST00000641375 SETD1BQ9UPS6 1966 aaKnown RBP22.09■■□□□ 1.13
PHGDH-216ENST00000641375 DIP2AQ14689 1571 aa22.08■■□□□ 1.13
PHGDH-216ENST00000641375 ZNF142P52746 1687 aaPredicted RBP22.08■■□□□ 1.13
PHGDH-216ENST00000641375 TERF2IPQ9NYB0 399 aa22.06■■□□□ 1.12
PHGDH-216ENST00000641375 NSD2O96028 1365 aa22.06■■□□□ 1.12
PHGDH-216ENST00000641375 TBX22Q9Y458 520 aa22.05■■□□□ 1.12
PHGDH-216ENST00000641375 A0A1W2PP64 1363 aa22.04■■□□□ 1.12
PHGDH-216ENST00000641375 WASLO00401 505 aaPredicted RBP22.02■■□□□ 1.12
PHGDH-216ENST00000641375 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
PHGDH-216ENST00000641375 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
PHGDH-216ENST00000641375 CD163L1Q9NR16 1453 aa22.01■■□□□ 1.11
PHGDH-216ENST00000641375 HDGFL2Q7Z4V5 671 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-216ENST00000641375 ROBO2Q9HCK4 1378 aa22■■□□□ 1.11
PHGDH-216ENST00000641375 ATP7BP35670 1465 aa22■■□□□ 1.11
PHGDH-216ENST00000641375 BLMP54132 1417 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-216ENST00000641375 ADGRB2O60241 1585 aa21.99■■□□□ 1.11
PHGDH-216ENST00000641375 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
PHGDH-216ENST00000641375 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
PHGDH-216ENST00000641375 PTPRUQ92729 1446 aa21.98■■□□□ 1.11
PHGDH-216ENST00000641375 PTCH1Q13635 1447 aa21.97■■□□□ 1.11
PHGDH-216ENST00000641375 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
PHGDH-216ENST00000641375 ANKRD26Q9UPS8 1709 aa21.96■■□□□ 1.11
PHGDH-216ENST00000641375 PIK3R4Q99570 1358 aa21.95■■□□□ 1.11
PHGDH-216ENST00000641375 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
PHGDH-216ENST00000641375 POLR3AO14802 1390 aaPredicted RBP21.95■■□□□ 1.1
PHGDH-216ENST00000641375 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.95■■□□□ 1.1
PHGDH-216ENST00000641375 ADAMTS8Q9UP79 889 aa21.94■■□□□ 1.1
PHGDH-216ENST00000641375 NEFLP07196 543 aa21.93■■□□□ 1.1
PHGDH-216ENST00000641375 PPIP5K1Q6PFW1 1433 aa21.93■■□□□ 1.1
PHGDH-216ENST00000641375 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
PHGDH-216ENST00000641375 KIF20BQ96Q89 1820 aa21.92■■□□□ 1.1
PHGDH-216ENST00000641375 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
PHGDH-216ENST00000641375 NUDT16Q96DE0 195 aaKnown RBP21.92■■□□□ 1.1
PHGDH-216ENST00000641375 CCDC61Q9Y6R9 512 aa21.92■■□□□ 1.1
PHGDH-216ENST00000641375 CPSF1Q10570 1443 aaKnown RBP21.9■■□□□ 1.1
PHGDH-216ENST00000641375 CDC42BPGQ6DT37 1551 aa21.89■■□□□ 1.09
PHGDH-216ENST00000641375 FYB1O15117 783 aa21.89■■□□□ 1.09
PHGDH-216ENST00000641375 TNNT2P45379 298 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-216ENST00000641375 SUPT16HQ9Y5B9 1047 aaKnown RBP21.89■■□□□ 1.09
PHGDH-216ENST00000641375 PDE3BQ13370 1112 aa21.88■■□□□ 1.09
PHGDH-216ENST00000641375 NUDCQ9Y266 331 aa21.88■■□□□ 1.09
PHGDH-216ENST00000641375 ITSN1Q15811 1721 aa21.88■■□□□ 1.09
PHGDH-216ENST00000641375 AKAP12Q02952 1782 aa21.87■■□□□ 1.09
PHGDH-216ENST00000641375 EDC4Q6P2E9 1401 aaKnown RBP21.87■■□□□ 1.09
PHGDH-216ENST00000641375 CFAP53Q96M91 514 aa21.87■■□□□ 1.09
PHGDH-216ENST00000641375 GGNBP2Q9H3C7 697 aa21.86■■□□□ 1.09
PHGDH-216ENST00000641375 MON2Q7Z3U7 1717 aa21.86■■□□□ 1.09
PHGDH-216ENST00000641375 TOPAZ1Q8N9V7 1692 aa21.86■■□□□ 1.09
PHGDH-216ENST00000641375 MTHFSP49914 203 aa21.85■■□□□ 1.09
PHGDH-216ENST00000641375 CHD2O14647 1828 aaKnown RBP21.85■■□□□ 1.09
PHGDH-216ENST00000641375 ZNF692Q9BU19 519 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-216ENST00000641375 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
PHGDH-216ENST00000641375 FKBP8Q14318 412 aa21.84■■□□□ 1.09
PHGDH-216ENST00000641375 SENP3-EIF4A1A0A087X0R7 540 aa21.83■■□□□ 1.09
PHGDH-216ENST00000641375 PRR36Q9H6K5 1346 aa21.83■■□□□ 1.09
PHGDH-216ENST00000641375 KCNA6P17658 529 aa21.81■■□□□ 1.08
PHGDH-216ENST00000641375 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-216ENST00000641375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.8■■□□□ 1.08
PHGDH-216ENST00000641375 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
PHGDH-216ENST00000641375 PLEKHG3A1L390 1219 aa21.79■■□□□ 1.08
PHGDH-216ENST00000641375 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
PHGDH-216ENST00000641375 NGEFQ8N5V2 710 aa21.78■■□□□ 1.08
PHGDH-216ENST00000641375 NRKQ7Z2Y5 1582 aa21.74■■□□□ 1.07
PHGDH-216ENST00000641375 ANKARQ7Z5J8 1434 aa21.74■■□□□ 1.07
PHGDH-216ENST00000641375 ACEP12821 1306 aa21.74■■□□□ 1.07
PHGDH-216ENST00000641375 CCDC146Q8IYE0 955 aa21.74■■□□□ 1.07
PHGDH-216ENST00000641375 NKTRP30414 1462 aaKnown RBP21.73■■□□□ 1.07
PHGDH-216ENST00000641375 NUTM2FA1L443 756 aa21.72■■□□□ 1.07
PHGDH-216ENST00000641375 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms