RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 NINLQ9Y2I6 1382 aa23.23■■□□□ 1.31
PHGDH-208ENST00000641023 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
PHGDH-208ENST00000641023 EID1Q9Y6B2 187 aa23.21■■□□□ 1.31
PHGDH-208ENST00000641023 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
PHGDH-208ENST00000641023 NSD3Q9BZ95 1437 aa23.21■■□□□ 1.31
PHGDH-208ENST00000641023 METP08581 1390 aa23.2■■□□□ 1.3
PHGDH-208ENST00000641023 ANKRD36BQ8N2N9 1353 aa23.2■■□□□ 1.3
PHGDH-208ENST00000641023 TXNDC2Q86VQ3 553 aa23.19■■□□□ 1.3
PHGDH-208ENST00000641023 INSRP06213 1382 aa23.18■■□□□ 1.3
PHGDH-208ENST00000641023 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
PHGDH-208ENST00000641023 THEMISQ8N1K5 641 aaPredicted RBP23.18■■□□□ 1.3
PHGDH-208ENST00000641023 LTKP29376 864 aa23.17■■□□□ 1.3
PHGDH-208ENST00000641023 WAPLQ7Z5K2 1190 aa23.17■■□□□ 1.3
PHGDH-208ENST00000641023 SIRT1Q96EB6 747 aa23.17■■□□□ 1.3
PHGDH-208ENST00000641023 CGNL1Q0VF96 1302 aa23.17■■□□□ 1.3
PHGDH-208ENST00000641023 CDK19Q9BWU1 502 aa23.17■■□□□ 1.3
PHGDH-208ENST00000641023 NEFLP07196 543 aa23.16■■□□□ 1.3
PHGDH-208ENST00000641023 SUPT16HQ9Y5B9 1047 aaKnown RBP23.15■■□□□ 1.3
PHGDH-208ENST00000641023 SLIT1O75093 1534 aa23.14■■□□□ 1.3
PHGDH-208ENST00000641023 TECPR2O15040 1411 aa23.13■■□□□ 1.29
PHGDH-208ENST00000641023 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
PHGDH-208ENST00000641023 TERF2IPQ9NYB0 399 aa23.13■■□□□ 1.29
PHGDH-208ENST00000641023 ADAMTS13Q76LX8 1427 aa23.13■■□□□ 1.29
PHGDH-208ENST00000641023 USP32Q8NFA0 1604 aa23.13■■□□□ 1.29
PHGDH-208ENST00000641023 PLEKHH1Q9ULM0 1364 aa23.13■■□□□ 1.29
PHGDH-208ENST00000641023 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
PHGDH-208ENST00000641023 MORC1Q86VD1 984 aa23.12■■□□□ 1.29
PHGDH-208ENST00000641023 NSD2O96028 1365 aa23.11■■□□□ 1.29
PHGDH-208ENST00000641023 WDR43Q15061 677 aaKnown RBP eCLIP23.11■■□□□ 1.29
PHGDH-208ENST00000641023 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
PHGDH-208ENST00000641023 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
PHGDH-208ENST00000641023 FKBP8Q14318 412 aa23.09■■□□□ 1.29
PHGDH-208ENST00000641023 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.29
PHGDH-208ENST00000641023 ADAMTS8Q9UP79 889 aa23.08■■□□□ 1.29
PHGDH-208ENST00000641023 CPS1P31327 1500 aa23.08■■□□□ 1.28
PHGDH-208ENST00000641023 HDGFL2Q7Z4V5 671 aaPredicted RBP23.07■■□□□ 1.28
PHGDH-208ENST00000641023 RIMS1Q86UR5 1692 aaKnown RBP23.07■■□□□ 1.28
PHGDH-208ENST00000641023 WASLO00401 505 aaPredicted RBP23.07■■□□□ 1.28
PHGDH-208ENST00000641023 MED14O60244 1454 aa23.06■■□□□ 1.28
PHGDH-208ENST00000641023 SMG6Q86US8 1419 aaKnown RBP23.06■■□□□ 1.28
PHGDH-208ENST00000641023 CABP1Q9NZU7 370 aa23.05■■□□□ 1.28
PHGDH-208ENST00000641023 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
PHGDH-208ENST00000641023 SLC26A8Q96RN1 970 aa23.05■■□□□ 1.28
PHGDH-208ENST00000641023 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
PHGDH-208ENST00000641023 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
PHGDH-208ENST00000641023 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
PHGDH-208ENST00000641023 POLR3AO14802 1390 aaPredicted RBP23.03■■□□□ 1.28
PHGDH-208ENST00000641023 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
PHGDH-208ENST00000641023 CD163L1Q9NR16 1453 aa23.03■■□□□ 1.28
PHGDH-208ENST00000641023 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
PHGDH-208ENST00000641023 PDE3BQ13370 1112 aa23.02■■□□□ 1.28
PHGDH-208ENST00000641023 TNNT2P45379 298 aaPredicted RBP23.01■■□□□ 1.27
PHGDH-208ENST00000641023 ATP7BP35670 1465 aa22.99■■□□□ 1.27
PHGDH-208ENST00000641023 SALL2Q9Y467 1007 aaPredicted RBP22.99■■□□□ 1.27
PHGDH-208ENST00000641023 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
PHGDH-208ENST00000641023 AMOTL2Q9Y2J4 779 aa22.97■■□□□ 1.27
PHGDH-208ENST00000641023 NUDT16Q96DE0 195 aaKnown RBP22.97■■□□□ 1.27
PHGDH-208ENST00000641023 CCDC61Q9Y6R9 512 aa22.97■■□□□ 1.27
PHGDH-208ENST00000641023 FYB1O15117 783 aa22.96■■□□□ 1.27
PHGDH-208ENST00000641023 PTPRUQ92729 1446 aa22.96■■□□□ 1.27
PHGDH-208ENST00000641023 CFAP53Q96M91 514 aa22.96■■□□□ 1.27
PHGDH-208ENST00000641023 PPIP5K1Q6PFW1 1433 aa22.95■■□□□ 1.26
PHGDH-208ENST00000641023 MTHFSP49914 203 aa22.95■■□□□ 1.26
PHGDH-208ENST00000641023 GGNBP2Q9H3C7 697 aa22.95■■□□□ 1.26
PHGDH-208ENST00000641023 ANKLE2Q86XL3 938 aa22.94■■□□□ 1.26
PHGDH-208ENST00000641023 SETD1BQ9UPS6 1966 aaKnown RBP22.93■■□□□ 1.26
PHGDH-208ENST00000641023 PTCH1Q13635 1447 aa22.92■■□□□ 1.26
PHGDH-208ENST00000641023 ADGRB2O60241 1585 aa22.92■■□□□ 1.26
PHGDH-208ENST00000641023 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
PHGDH-208ENST00000641023 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
PHGDH-208ENST00000641023 ZNF142P52746 1687 aaPredicted RBP22.91■■□□□ 1.26
PHGDH-208ENST00000641023 ERICH6BQ5W0A0 696 aa22.89■■□□□ 1.25
PHGDH-208ENST00000641023 ZNF692Q9BU19 519 aaPredicted RBP22.89■■□□□ 1.25
PHGDH-208ENST00000641023 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.89■■□□□ 1.25
PHGDH-208ENST00000641023 EDC4Q6P2E9 1401 aaKnown RBP22.88■■□□□ 1.25
PHGDH-208ENST00000641023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.88■■□□□ 1.25
PHGDH-208ENST00000641023 ANKRD26Q9UPS8 1709 aa22.88■■□□□ 1.25
PHGDH-208ENST00000641023 CCDC146Q8IYE0 955 aa22.87■■□□□ 1.25
PHGDH-208ENST00000641023 NGEFQ8N5V2 710 aa22.86■■□□□ 1.25
PHGDH-208ENST00000641023 PRR36Q9H6K5 1346 aa22.86■■□□□ 1.25
PHGDH-208ENST00000641023 CDC42BPGQ6DT37 1551 aa22.86■■□□□ 1.25
PHGDH-208ENST00000641023 NCKAP5LQ9HCH0 1330 aa22.85■■□□□ 1.25
PHGDH-208ENST00000641023 KIF20BQ96Q89 1820 aa22.84■■□□□ 1.25
PHGDH-208ENST00000641023 APAF1O14727 1248 aa22.84■■□□□ 1.25
PHGDH-208ENST00000641023 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
PHGDH-208ENST00000641023 CDCA7LQ96GN5 454 aa22.84■■□□□ 1.25
PHGDH-208ENST00000641023 PELP1Q8IZL8 1130 aaKnown RBP22.83■■□□□ 1.25
PHGDH-208ENST00000641023 SHPRHQ149N8 1683 aa22.82■■□□□ 1.24
PHGDH-208ENST00000641023 XRN1Q8IZH2 1706 aaKnown RBP22.82■■□□□ 1.24
PHGDH-208ENST00000641023 RNF123Q5XPI4 1314 aa22.82■■□□□ 1.24
PHGDH-208ENST00000641023 KCNA6P17658 529 aa22.81■■□□□ 1.24
PHGDH-208ENST00000641023 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
PHGDH-208ENST00000641023 ZNF521Q96K83 1311 aa22.81■■□□□ 1.24
PHGDH-208ENST00000641023 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
PHGDH-208ENST00000641023 RUNDC1Q96C34 613 aa22.8■■□□□ 1.24
PHGDH-208ENST00000641023 NUTM2FA1L443 756 aa22.79■■□□□ 1.24
PHGDH-208ENST00000641023 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
PHGDH-208ENST00000641023 RCAN3Q9UKA8 241 aa22.78■■□□□ 1.24
PHGDH-208ENST00000641023 ITSN1Q15811 1721 aa22.78■■□□□ 1.24
PHGDH-208ENST00000641023 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms