RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 PDE3AQ14432 1141 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 MROH2AA6NES4 1674 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 NSD2O96028 1365 aa7.05□□□□□ -1.28
SCN3A-210ENST00000640652 CT47B1P0C2W7 299 aaPredicted RBP7.04□□□□□ -1.28
SCN3A-210ENST00000640652 RUNDC1Q96C34 613 aa7.04□□□□□ -1.28
SCN3A-210ENST00000640652 POGKQ9P215 609 aa7.04□□□□□ -1.28
SCN3A-210ENST00000640652 MYOM2P54296 1465 aa7.04□□□□□ -1.28
SCN3A-210ENST00000640652 CLUAP1Q96AJ1 413 aa7.04□□□□□ -1.28
SCN3A-210ENST00000640652 UHRF1BP1LA0JNW5 1464 aa7.04□□□□□ -1.28
SCN3A-210ENST00000640652 TRIM44Q96DX7 344 aaPredicted RBP7.04□□□□□ -1.28
SCN3A-210ENST00000640652 U2AF1L5P0DN76 240 aaPredicted RBP7.03□□□□□ -1.28
SCN3A-210ENST00000640652 U2AF1Q01081 240 aaKnown RBP eCLIP7.03□□□□□ -1.28
SCN3A-210ENST00000640652 SRPK2P78362 688 aaKnown RBP7.03□□□□□ -1.28
SCN3A-210ENST00000640652 KIF16BQ96L93 1317 aa7.03□□□□□ -1.28
SCN3A-210ENST00000640652 PAK3O75914 559 aaPredicted RBP7.03□□□□□ -1.28
SCN3A-210ENST00000640652 CDCA7LQ96GN5 454 aa7.03□□□□□ -1.28
SCN3A-210ENST00000640652 HDGFL2Q7Z4V5 671 aaPredicted RBP7.02□□□□□ -1.28
SCN3A-210ENST00000640652 ITPRIPQ8IWB1 547 aa7.02□□□□□ -1.28
SCN3A-210ENST00000640652 VGFO15240 615 aaPredicted RBP7.02□□□□□ -1.29
SCN3A-210ENST00000640652 KIDINS220Q9ULH0 1771 aa7.02□□□□□ -1.29
SCN3A-210ENST00000640652 U2SURPO15042 1029 aaKnown RBP7.02□□□□□ -1.29
SCN3A-210ENST00000640652 SMC4Q9NTJ3 1288 aa7.02□□□□□ -1.29
SCN3A-210ENST00000640652 DDX11L8A8MPP1 907 aa7.02□□□□□ -1.29
SCN3A-210ENST00000640652 PPRC1Q5VV67 1664 aaKnown RBP7.02□□□□□ -1.29
SCN3A-210ENST00000640652 GBP4Q96PP9 640 aa7.02□□□□□ -1.29
SCN3A-210ENST00000640652 NSD3Q9BZ95 1437 aa7.02□□□□□ -1.29
SCN3A-210ENST00000640652 ZKSCAN2Q63HK3 967 aa7.02□□□□□ -1.29
SCN3A-210ENST00000640652 DDX19BQ9UMR2 479 aa7.02□□□□□ -1.29
SCN3A-210ENST00000640652 APAF1O14727 1248 aa7.01□□□□□ -1.29
SCN3A-210ENST00000640652 HSP90AB1P08238 724 aaKnown RBP7.01□□□□□ -1.29
SCN3A-210ENST00000640652 RPGRIP1LQ68CZ1 1315 aa7.01□□□□□ -1.29
SCN3A-210ENST00000640652 TESK2Q96S53 571 aa7□□□□□ -1.29
SCN3A-210ENST00000640652 LMOD3Q0VAK6 560 aa7□□□□□ -1.29
SCN3A-210ENST00000640652 GLI2P10070 1586 aa7□□□□□ -1.29
SCN3A-210ENST00000640652 NFKBIBQ15653 356 aa7□□□□□ -1.29
SCN3A-210ENST00000640652 FRMPD1Q5SYB0 1578 aa7□□□□□ -1.29
SCN3A-210ENST00000640652 SLFN5Q08AF3 891 aa7□□□□□ -1.29
SCN3A-210ENST00000640652 SLKQ9H2G2 1235 aaPredicted RBP7□□□□□ -1.29
SCN3A-210ENST00000640652 WDR63Q8IWG1 891 aa7□□□□□ -1.29
SCN3A-210ENST00000640652 ZMYM3Q14202 1370 aa6.99□□□□□ -1.29
SCN3A-210ENST00000640652 RSPH6AQ9H0K4 717 aa6.99□□□□□ -1.29
SCN3A-210ENST00000640652 FMN2Q9NZ56 1722 aa6.99□□□□□ -1.29
SCN3A-210ENST00000640652 ARXQ96QS3 562 aa6.99□□□□□ -1.29
SCN3A-210ENST00000640652 DUSP27Q5VZP5 1158 aa6.99□□□□□ -1.29
SCN3A-210ENST00000640652 RTN4Q9NQC3 1192 aaKnown RBP6.99□□□□□ -1.29
SCN3A-210ENST00000640652 DZIP1LQ8IYY4 767 aaKnown RBP6.98□□□□□ -1.29
SCN3A-210ENST00000640652 AKAP12Q02952 1782 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 SBNO2Q9Y2G9 1366 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 GOLGA6L3A6NEY3 463 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 GGT6Q6P531 493 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 PER1O15534 1290 aaPredicted RBP6.98□□□□□ -1.29
SCN3A-210ENST00000640652 SHPRHQ149N8 1683 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 AMER1Q5JTC6 1135 aaPredicted RBP6.98□□□□□ -1.29
SCN3A-210ENST00000640652 COG6Q9Y2V7 657 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 AFAP1Q8N556 730 aa6.98□□□□□ -1.29
SCN3A-210ENST00000640652 POLR3AO14802 1390 aaPredicted RBP6.97□□□□□ -1.29
SCN3A-210ENST00000640652 DNAJC5BQ9UF47 199 aa6.97□□□□□ -1.29
SCN3A-210ENST00000640652 ATAD2Q6PL18 1390 aa6.97□□□□□ -1.29
SCN3A-210ENST00000640652 HDGFP51858 240 aaKnown RBP6.97□□□□□ -1.29
SCN3A-210ENST00000640652 TRAK1Q9UPV9 953 aa6.97□□□□□ -1.29
SCN3A-210ENST00000640652 TRAPPC8Q9Y2L5 1435 aa6.97□□□□□ -1.29
SCN3A-210ENST00000640652 ADGRB3O60242 1522 aa6.97□□□□□ -1.29
SCN3A-210ENST00000640652 PREX1Q8TCU6 1659 aa6.97□□□□□ -1.29
SCN3A-210ENST00000640652 PANK1Q8TE04 598 aa6.97□□□□□ -1.29
SCN3A-210ENST00000640652 RRP7AQ9Y3A4 280 aaKnown RBP6.96□□□□□ -1.29
SCN3A-210ENST00000640652 PTPRTO14522 1441 aa6.96□□□□□ -1.29
SCN3A-210ENST00000640652 SKOR2Q2VWA4 1001 aaPredicted RBP6.96□□□□□ -1.3
SCN3A-210ENST00000640652 WWC1Q8IX03 1113 aa6.96□□□□□ -1.3
SCN3A-210ENST00000640652 NOS1P29475 1434 aa6.96□□□□□ -1.3
SCN3A-210ENST00000640652 MFAP1P55081 439 aaKnown RBP6.96□□□□□ -1.3
SCN3A-210ENST00000640652 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 TCP11L2Q8N4U5 519 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 MCCP23508 829 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 CFAP70Q5T0N1 1121 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 ASXL2Q76L83 1435 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 ANKRD36BQ8N2N9 1353 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 PLA2R1Q13018 1463 aa6.95□□□□□ -1.3
SCN3A-210ENST00000640652 ZFYVE9O95405 1425 aa6.94□□□□□ -1.3
SCN3A-210ENST00000640652 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCN3A-210ENST00000640652 ISY1Q9ULR0 285 aaKnown RBP6.94□□□□□ -1.3
SCN3A-210ENST00000640652 NCLP19338 710 aaKnown RBP6.94□□□□□ -1.3
SCN3A-210ENST00000640652 MVPQ14764 893 aaKnown RBP6.94□□□□□ -1.3
SCN3A-210ENST00000640652 KDM2BQ8NHM5 1336 aa6.94□□□□□ -1.3
SCN3A-210ENST00000640652 MTHFSP49914 203 aa6.94□□□□□ -1.3
SCN3A-210ENST00000640652 C20orf194Q5TEA3 1177 aa6.94□□□□□ -1.3
SCN3A-210ENST00000640652 SLC52A1Q9NWF4 448 aa6.94□□□□□ -1.3
SCN3A-210ENST00000640652 CCDC27Q2M243 656 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 C22orf23Q9BZE7 217 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 STK26Q9P289 416 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 ERVK-7P63135 1459 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 HMMRO75330 724 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 ERCC6L2Q5T890 1561 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 NAP1L5Q96NT1 182 aaPredicted RBP6.93□□□□□ -1.3
SCN3A-210ENST00000640652 BCL2L13Q9BXK5 485 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 VWDEQ8N2E2 1590 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 CLTCQ00610 1675 aaKnown RBP6.93□□□□□ -1.3
SCN3A-210ENST00000640652 BCAR3O75815 825 aa6.93□□□□□ -1.3
SCN3A-210ENST00000640652 ST18O60284 1047 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms