RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
HLA-B-258ENST00000640615 WASHC2AQ641Q2 1341 aa12.2□□□□□ -0.46
HLA-B-258ENST00000640615 KCNA6P17658 529 aa12.2□□□□□ -0.46
HLA-B-258ENST00000640615 DLC1Q96QB1 1528 aa12.2□□□□□ -0.46
HLA-B-258ENST00000640615 XIRP1Q702N8 1843 aaKnown RBP12.2□□□□□ -0.46
HLA-B-258ENST00000640615 TECPR2O15040 1411 aa12.2□□□□□ -0.46
HLA-B-258ENST00000640615 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
HLA-B-258ENST00000640615 KIF7Q2M1P5 1343 aa12.19□□□□□ -0.46
HLA-B-258ENST00000640615 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
HLA-B-258ENST00000640615 FAM135BQ49AJ0 1406 aa12.19□□□□□ -0.46
HLA-B-258ENST00000640615 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
HLA-B-258ENST00000640615 DDX10Q13206 875 aaKnown RBP12.18□□□□□ -0.46
HLA-B-258ENST00000640615 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
HLA-B-258ENST00000640615 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
HLA-B-258ENST00000640615 PIP4K2BP78356 416 aa12.17□□□□□ -0.46
HLA-B-258ENST00000640615 ARHGEF28Q8N1W1 1705 aaKnown RBP12.17□□□□□ -0.46
HLA-B-258ENST00000640615 EVC2Q86UK5 1308 aa12.16□□□□□ -0.46
HLA-B-258ENST00000640615 PTCH1Q13635 1447 aa12.16□□□□□ -0.46
HLA-B-258ENST00000640615 KNDC1Q76NI1 1749 aa12.15□□□□□ -0.46
HLA-B-258ENST00000640615 PROSER2Q86WR7 435 aaPredicted RBP12.15□□□□□ -0.46
HLA-B-258ENST00000640615 QRICH2Q9H0J4 1663 aa12.15□□□□□ -0.46
HLA-B-258ENST00000640615 SRPK2P78362 688 aaKnown RBP12.14□□□□□ -0.47
HLA-B-258ENST00000640615 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
HLA-B-258ENST00000640615 CDK19Q9BWU1 502 aa12.14□□□□□ -0.47
HLA-B-258ENST00000640615 CABP2Q9NPB3 220 aa12.14□□□□□ -0.47
HLA-B-258ENST00000640615 XRN1Q8IZH2 1706 aaKnown RBP12.14□□□□□ -0.47
HLA-B-258ENST00000640615 DIEXFQ68CQ4 756 aaKnown RBP12.13□□□□□ -0.47
HLA-B-258ENST00000640615 C14orf37Q86TY3 774 aa12.13□□□□□ -0.47
HLA-B-258ENST00000640615 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
HLA-B-258ENST00000640615 WASLO00401 505 aaPredicted RBP12.12□□□□□ -0.47
HLA-B-258ENST00000640615 CHD2O14647 1828 aaKnown RBP12.11□□□□□ -0.47
HLA-B-258ENST00000640615 NWD1Q149M9 1564 aa12.11□□□□□ -0.47
HLA-B-258ENST00000640615 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
HLA-B-258ENST00000640615 PUS7Q96PZ0 661 aaKnown RBP12.11□□□□□ -0.47
HLA-B-258ENST00000640615 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
HLA-B-258ENST00000640615 NKTRP30414 1462 aaKnown RBP12.09□□□□□ -0.47
HLA-B-258ENST00000640615 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
HLA-B-258ENST00000640615 PANK3Q9H999 370 aa12.08□□□□□ -0.48
HLA-B-258ENST00000640615 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.48
HLA-B-258ENST00000640615 TMEM94Q12767 1356 aa12.07□□□□□ -0.48
HLA-B-258ENST00000640615 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
HLA-B-258ENST00000640615 NUDT16Q96DE0 195 aaKnown RBP12.07□□□□□ -0.48
HLA-B-258ENST00000640615 SLC12A5Q9H2X9 1139 aa12.07□□□□□ -0.48
HLA-B-258ENST00000640615 ADGRL3Q9HAR2 1447 aa12.06□□□□□ -0.48
HLA-B-258ENST00000640615 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
HLA-B-258ENST00000640615 C19orf44Q9H6X5 657 aa12.05□□□□□ -0.48
HLA-B-258ENST00000640615 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
HLA-B-258ENST00000640615 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
HLA-B-258ENST00000640615 ADGRB2O60241 1585 aa12.05□□□□□ -0.48
HLA-B-258ENST00000640615 NCOA3Q9Y6Q9 1424 aa12.04□□□□□ -0.48
HLA-B-258ENST00000640615 ROBO1Q9Y6N7 1651 aa12.04□□□□□ -0.48
HLA-B-258ENST00000640615 ATF3P18847 181 aa12.04□□□□□ -0.48
HLA-B-258ENST00000640615 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
HLA-B-258ENST00000640615 TERF2IPQ9NYB0 399 aa12.03□□□□□ -0.48
HLA-B-258ENST00000640615 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
HLA-B-258ENST00000640615 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
HLA-B-258ENST00000640615 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
HLA-B-258ENST00000640615 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.49
HLA-B-258ENST00000640615 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.49
HLA-B-258ENST00000640615 MSH6P52701 1360 aa12.02□□□□□ -0.49
HLA-B-258ENST00000640615 NALCNQ8IZF0 1738 aa12.01□□□□□ -0.49
HLA-B-258ENST00000640615 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
HLA-B-258ENST00000640615 ANP32CO43423 234 aa12.01□□□□□ -0.49
HLA-B-258ENST00000640615 KNSTRNQ9Y448 316 aa12.01□□□□□ -0.49
HLA-B-258ENST00000640615 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
HLA-B-258ENST00000640615 ATP7BP35670 1465 aa12.01□□□□□ -0.49
HLA-B-258ENST00000640615 CDC42BPGQ6DT37 1551 aa12.01□□□□□ -0.49
HLA-B-258ENST00000640615 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
HLA-B-258ENST00000640615 CADPS2Q86UW7 1296 aa12□□□□□ -0.49
HLA-B-258ENST00000640615 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
HLA-B-258ENST00000640615 CARD14Q9BXL6 1004 aa12□□□□□ -0.49
HLA-B-258ENST00000640615 ANKRD36BQ8N2N9 1353 aa12□□□□□ -0.49
HLA-B-258ENST00000640615 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
HLA-B-258ENST00000640615 A0A1W2PP64 1363 aa11.99□□□□□ -0.49
HLA-B-258ENST00000640615 MYOM1P52179 1685 aa11.98□□□□□ -0.49
HLA-B-258ENST00000640615 ACEP12821 1306 aa11.98□□□□□ -0.49
HLA-B-258ENST00000640615 MIER1Q8N108 512 aa11.98□□□□□ -0.49
HLA-B-258ENST00000640615 NGDNQ8NEJ9 315 aaKnown RBP11.98□□□□□ -0.49
HLA-B-258ENST00000640615 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
HLA-B-258ENST00000640615 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
HLA-B-258ENST00000640615 FMN2Q9NZ56 1722 aa11.97□□□□□ -0.49
HLA-B-258ENST00000640615 DCCP43146 1447 aa11.97□□□□□ -0.49
HLA-B-258ENST00000640615 NSD3Q9BZ95 1437 aa11.97□□□□□ -0.49
HLA-B-258ENST00000640615 KTN1Q86UP2 1357 aaKnown RBP11.97□□□□□ -0.49
HLA-B-258ENST00000640615 CC2D1BQ5T0F9 858 aaKnown RBP11.97□□□□□ -0.49
HLA-B-258ENST00000640615 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
HLA-B-258ENST00000640615 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
HLA-B-258ENST00000640615 CD163L1Q9NR16 1453 aa11.96□□□□□ -0.49
HLA-B-258ENST00000640615 USP32Q8NFA0 1604 aa11.96□□□□□ -0.5
HLA-B-258ENST00000640615 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
HLA-B-258ENST00000640615 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
HLA-B-258ENST00000640615 PHLPP1O60346 1717 aa11.95□□□□□ -0.5
HLA-B-258ENST00000640615 CGNL1Q0VF96 1302 aa11.95□□□□□ -0.5
HLA-B-258ENST00000640615 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
HLA-B-258ENST00000640615 SLAIN2Q9P270 581 aa11.95□□□□□ -0.5
HLA-B-258ENST00000640615 MST1RQ04912 1400 aa11.94□□□□□ -0.5
HLA-B-258ENST00000640615 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
HLA-B-258ENST00000640615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.5
HLA-B-258ENST00000640615 PRKRIP1Q9H875 184 aaPredicted RBP11.94□□□□□ -0.5
HLA-B-258ENST00000640615 POLR3AO14802 1390 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms