RNA–Protein interactions for RNA: ENST00000640461.1

KCNC1-212, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-212ENST00000640461 PCMTD1Q96MG8 357 aaPredicted RBP18.38■□□□□ 0.53
KCNC1-212ENST00000640461 FDX1P10109 184 aa18.37■□□□□ 0.53
KCNC1-212ENST00000640461 GJA5P36382 358 aa18.37■□□□□ 0.53
KCNC1-212ENST00000640461 BLOC1S3Q6QNY0 202 aa18.36■□□□□ 0.53
KCNC1-212ENST00000640461 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
KCNC1-212ENST00000640461 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
KCNC1-212ENST00000640461 PCDHGC3Q9UN70 934 aa18.35■□□□□ 0.53
KCNC1-212ENST00000640461 SLC27A5Q9Y2P5 690 aa18.34■□□□□ 0.53
KCNC1-212ENST00000640461 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.52
KCNC1-212ENST00000640461 SMARCA4P51532 1647 aa18.33■□□□□ 0.52
KCNC1-212ENST00000640461 COPS2P61201 443 aa18.32■□□□□ 0.52
KCNC1-212ENST00000640461 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
KCNC1-212ENST00000640461 TUSC1Q2TAM9 212 aa18.32■□□□□ 0.52
KCNC1-212ENST00000640461 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
KCNC1-212ENST00000640461 ATP1B4Q9UN42 357 aaPredicted RBP18.31■□□□□ 0.52
KCNC1-212ENST00000640461 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
KCNC1-212ENST00000640461 MTRQ99707 1265 aa18.29■□□□□ 0.52
KCNC1-212ENST00000640461 NR1I2O75469 434 aa18.28■□□□□ 0.52
KCNC1-212ENST00000640461 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
KCNC1-212ENST00000640461 BAZ1BQ9UIG0 1483 aaKnown RBP18.27■□□□□ 0.52
KCNC1-212ENST00000640461 QPCTQ16769 361 aa18.27■□□□□ 0.52
KCNC1-212ENST00000640461 TJAP1Q5JTD0 557 aa18.26■□□□□ 0.51
KCNC1-212ENST00000640461 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
KCNC1-212ENST00000640461 CABLES1Q8TDN4 633 aa18.24■□□□□ 0.51
KCNC1-212ENST00000640461 SYMPKQ92797 1274 aaKnown RBP18.24■□□□□ 0.51
KCNC1-212ENST00000640461 LILRB3O75022 631 aa18.23■□□□□ 0.51
KCNC1-212ENST00000640461 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
KCNC1-212ENST00000640461 RNF19BQ6ZMZ0 732 aa18.23■□□□□ 0.51
KCNC1-212ENST00000640461 HRCP23327 699 aa18.22■□□□□ 0.51
KCNC1-212ENST00000640461 Q3C1V9 767 aa18.22■□□□□ 0.51
KCNC1-212ENST00000640461 ZBTB3Q9H5J0 574 aa18.22■□□□□ 0.51
KCNC1-212ENST00000640461 THAP11Q96EK4 314 aa18.21■□□□□ 0.51
KCNC1-212ENST00000640461 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
KCNC1-212ENST00000640461 C6orf229H3BNL8 230 aa18.2■□□□□ 0.5
KCNC1-212ENST00000640461 ZPR1O75312 459 aa18.2■□□□□ 0.5
KCNC1-212ENST00000640461 MTMR2Q13614 643 aa18.2■□□□□ 0.5
KCNC1-212ENST00000640461 ZNF516Q92618 1163 aa18.2■□□□□ 0.5
KCNC1-212ENST00000640461 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
KCNC1-212ENST00000640461 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
KCNC1-212ENST00000640461 BRICD5Q6PL45 260 aa18.19■□□□□ 0.5
KCNC1-212ENST00000640461 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
KCNC1-212ENST00000640461 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
KCNC1-212ENST00000640461 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
KCNC1-212ENST00000640461 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
KCNC1-212ENST00000640461 NUTM2DQ5VT03 806 aaPredicted RBP18.18■□□□□ 0.5
KCNC1-212ENST00000640461 PPP2R2DQ66LE6 453 aa18.18■□□□□ 0.5
KCNC1-212ENST00000640461 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
KCNC1-212ENST00000640461 TLL1O43897 1013 aa18.17■□□□□ 0.5
KCNC1-212ENST00000640461 FMNL1O95466 1100 aaPredicted RBP18.17■□□□□ 0.5
KCNC1-212ENST00000640461 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
KCNC1-212ENST00000640461 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
KCNC1-212ENST00000640461 RETREG3Q86VR2 466 aa18.14■□□□□ 0.49
KCNC1-212ENST00000640461 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
KCNC1-212ENST00000640461 RFC5P40937 340 aa18.13■□□□□ 0.49
KCNC1-212ENST00000640461 SPDYE5A6NIY4 337 aa18.12■□□□□ 0.49
KCNC1-212ENST00000640461 USB1Q9BQ65 265 aaKnown RBP18.12■□□□□ 0.49
KCNC1-212ENST00000640461 SPSB2Q99619 263 aa18.11■□□□□ 0.49
KCNC1-212ENST00000640461 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
KCNC1-212ENST00000640461 CFAP99D6REC4 459 aa18.1■□□□□ 0.49
KCNC1-212ENST00000640461 KCNC4Q03721 635 aa18.09■□□□□ 0.49
KCNC1-212ENST00000640461 NKX2-3Q8TAU0 364 aa18.09■□□□□ 0.49
KCNC1-212ENST00000640461 PRR7Q8TB68 274 aa18.09■□□□□ 0.49
KCNC1-212ENST00000640461 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
KCNC1-212ENST00000640461 ADH1BP00325 375 aa18.08■□□□□ 0.48
KCNC1-212ENST00000640461 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.48
KCNC1-212ENST00000640461 FAM160A2Q8N612 972 aaPredicted RBP18.06■□□□□ 0.48
KCNC1-212ENST00000640461 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
KCNC1-212ENST00000640461 MSS51Q4VC12 460 aa18.04■□□□□ 0.48
KCNC1-212ENST00000640461 PRDM9Q9NQV7 894 aa18.03■□□□□ 0.48
KCNC1-212ENST00000640461 TSC1Q92574 1164 aa18.02■□□□□ 0.48
KCNC1-212ENST00000640461 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
KCNC1-212ENST00000640461 AP1G2O75843 785 aa18■□□□□ 0.47
KCNC1-212ENST00000640461 TMEM259Q4ZIN3 620 aa18■□□□□ 0.47
KCNC1-212ENST00000640461 HELBQ8NG08 1087 aaPredicted RBP17.99■□□□□ 0.47
KCNC1-212ENST00000640461 DESI1Q6ICB0 168 aa17.98■□□□□ 0.47
KCNC1-212ENST00000640461 SLC6A16Q9GZN6 736 aa17.98■□□□□ 0.47
KCNC1-212ENST00000640461 PLSCR2Q9NRY7 297 aa17.98■□□□□ 0.47
KCNC1-212ENST00000640461 JUNDP17535 347 aa17.97■□□□□ 0.47
KCNC1-212ENST00000640461 CTDSPL2Q05D32 466 aa17.96■□□□□ 0.47
KCNC1-212ENST00000640461 WDR62O43379 1518 aa17.95■□□□□ 0.46
KCNC1-212ENST00000640461 DXOO77932 396 aaKnown RBP17.95■□□□□ 0.46
KCNC1-212ENST00000640461 S1PR4O95977 384 aa17.95■□□□□ 0.46
KCNC1-212ENST00000640461 USP17L8P0C7I0 530 aa17.94■□□□□ 0.46
KCNC1-212ENST00000640461 MMP16P51512 607 aa17.94■□□□□ 0.46
KCNC1-212ENST00000640461 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
KCNC1-212ENST00000640461 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
KCNC1-212ENST00000640461 LYPD8Q6UX82 237 aa17.9■□□□□ 0.46
KCNC1-212ENST00000640461 IFFO2Q5TF58 517 aa17.89■□□□□ 0.45
KCNC1-212ENST00000640461 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
KCNC1-212ENST00000640461 PLA2G2EQ9NZK7 142 aa17.89■□□□□ 0.45
KCNC1-212ENST00000640461 LRRN4Q8WUT4 740 aa17.88■□□□□ 0.45
KCNC1-212ENST00000640461 MCM6Q14566 821 aa17.87■□□□□ 0.45
KCNC1-212ENST00000640461 PTPRNQ16849 979 aa17.86■□□□□ 0.45
KCNC1-212ENST00000640461 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
KCNC1-212ENST00000640461 FLIIQ13045 1269 aa17.84■□□□□ 0.45
KCNC1-212ENST00000640461 PPP1R18Q6NYC8 613 aa17.84■□□□□ 0.45
KCNC1-212ENST00000640461 MTMR14Q8NCE2 650 aa17.84■□□□□ 0.45
KCNC1-212ENST00000640461 HMX1Q9NP08 348 aaPredicted RBP17.84■□□□□ 0.45
KCNC1-212ENST00000640461 WIZO95785 1651 aa17.83■□□□□ 0.45
KCNC1-212ENST00000640461 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms