RNA–Protein interactions for RNA: ENST00000640172.1

PAX6-265, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-265ENST00000640172 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
PAX6-265ENST00000640172 CCDC173Q0VFZ6 552 aa16.59■□□□□ 0.25
PAX6-265ENST00000640172 PLXNC1O60486 1568 aa16.58■□□□□ 0.25
PAX6-265ENST00000640172 RBM25P49756 843 aaKnown RBP16.58■□□□□ 0.25
PAX6-265ENST00000640172 SYNJ2O15056 1496 aa16.58■□□□□ 0.25
PAX6-265ENST00000640172 AK9Q5TCS8 1911 aa16.58■□□□□ 0.25
PAX6-265ENST00000640172 MYOM1P52179 1685 aa16.58■□□□□ 0.24
PAX6-265ENST00000640172 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
PAX6-265ENST00000640172 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.24
PAX6-265ENST00000640172 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
PAX6-265ENST00000640172 SNX21Q969T3 373 aa16.57■□□□□ 0.24
PAX6-265ENST00000640172 GBP4Q96PP9 640 aa16.57■□□□□ 0.24
PAX6-265ENST00000640172 MSNP26038 577 aaKnown RBP16.56■□□□□ 0.24
PAX6-265ENST00000640172 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
PAX6-265ENST00000640172 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
PAX6-265ENST00000640172 SYNMO15061 1565 aa16.56■□□□□ 0.24
PAX6-265ENST00000640172 TSR2Q969E8 191 aaKnown RBP16.56■□□□□ 0.24
PAX6-265ENST00000640172 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
PAX6-265ENST00000640172 DZIP1LQ8IYY4 767 aaKnown RBP16.55■□□□□ 0.24
PAX6-265ENST00000640172 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
PAX6-265ENST00000640172 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
PAX6-265ENST00000640172 TRIM27P14373 513 aa16.54■□□□□ 0.24
PAX6-265ENST00000640172 UQCRHLA0A096LP55 91 aa16.54■□□□□ 0.24
PAX6-265ENST00000640172 UQCRHP07919 91 aa16.54■□□□□ 0.24
PAX6-265ENST00000640172 SKOR2Q2VWA4 1001 aaPredicted RBP16.54■□□□□ 0.24
PAX6-265ENST00000640172 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
PAX6-265ENST00000640172 CHAMP1Q96JM3 812 aa16.54■□□□□ 0.24
PAX6-265ENST00000640172 RBSNQ9H1K0 784 aa16.54■□□□□ 0.24
PAX6-265ENST00000640172 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
PAX6-265ENST00000640172 RNF17Q9BXT8 1623 aaKnown RBP16.54■□□□□ 0.24
PAX6-265ENST00000640172 NUP160Q12769 1436 aa16.54■□□□□ 0.24
PAX6-265ENST00000640172 AAMPQ13685 434 aa16.53■□□□□ 0.24
PAX6-265ENST00000640172 EIF2AK4Q9P2K8 1649 aaKnown RBP16.53■□□□□ 0.24
PAX6-265ENST00000640172 PKP1Q13835 747 aa16.53■□□□□ 0.24
PAX6-265ENST00000640172 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
PAX6-265ENST00000640172 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
PAX6-265ENST00000640172 ZBTB7CA1YPR0 619 aa16.52■□□□□ 0.24
PAX6-265ENST00000640172 ITPRIPQ8IWB1 547 aa16.52■□□□□ 0.24
PAX6-265ENST00000640172 RUNDC1Q96C34 613 aa16.52■□□□□ 0.24
PAX6-265ENST00000640172 BAG4O95429 457 aaKnown RBP16.52■□□□□ 0.23
PAX6-265ENST00000640172 ZKSCAN2Q63HK3 967 aa16.52■□□□□ 0.23
PAX6-265ENST00000640172 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.23
PAX6-265ENST00000640172 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
PAX6-265ENST00000640172 CDCA8Q53HL2 280 aa16.51■□□□□ 0.23
PAX6-265ENST00000640172 KLHL40Q2TBA0 621 aa16.51■□□□□ 0.23
PAX6-265ENST00000640172 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
PAX6-265ENST00000640172 NOL7Q9UMY1 257 aaKnown RBP16.51■□□□□ 0.23
PAX6-265ENST00000640172 ATP10BO94823 1461 aa16.5■□□□□ 0.23
PAX6-265ENST00000640172 NGEFQ8N5V2 710 aa16.5■□□□□ 0.23
PAX6-265ENST00000640172 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
PAX6-265ENST00000640172 NCLP19338 710 aaKnown RBP16.5■□□□□ 0.23
PAX6-265ENST00000640172 PRIM1P49642 420 aaKnown RBP16.5■□□□□ 0.23
PAX6-265ENST00000640172 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
PAX6-265ENST00000640172 ZSCAN23Q3MJ62 389 aa16.49■□□□□ 0.23
PAX6-265ENST00000640172 MCTP1Q6DN14 999 aa16.49■□□□□ 0.23
PAX6-265ENST00000640172 WDR63Q8IWG1 891 aa16.49■□□□□ 0.23
PAX6-265ENST00000640172 SSH1Q8WYL5 1049 aa16.49■□□□□ 0.23
PAX6-265ENST00000640172 TSC1Q92574 1164 aa16.49■□□□□ 0.23
PAX6-265ENST00000640172 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
PAX6-265ENST00000640172 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
PAX6-265ENST00000640172 TMEM57Q8N5G2 664 aa16.48■□□□□ 0.23
PAX6-265ENST00000640172 SCAF11Q99590 1463 aaKnown RBP16.48■□□□□ 0.23
PAX6-265ENST00000640172 ZNF500O60304 480 aaPredicted RBP16.48■□□□□ 0.23
PAX6-265ENST00000640172 TERF1P54274 439 aa16.48■□□□□ 0.23
PAX6-265ENST00000640172 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
PAX6-265ENST00000640172 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
PAX6-265ENST00000640172 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
PAX6-265ENST00000640172 PDLIM2Q96JY6 352 aa16.47■□□□□ 0.23
PAX6-265ENST00000640172 SAMD9LQ8IVG5 1584 aa16.47■□□□□ 0.23
PAX6-265ENST00000640172 IQSEC2Q5JU85 1478 aa16.47■□□□□ 0.23
PAX6-265ENST00000640172 NOB1Q9ULX3 412 aaKnown RBP16.47■□□□□ 0.23
PAX6-265ENST00000640172 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
PAX6-265ENST00000640172 MADDQ8WXG6 1647 aa16.47■□□□□ 0.23
PAX6-265ENST00000640172 NUCB1Q02818 461 aa16.46■□□□□ 0.23
PAX6-265ENST00000640172 ZBTB40Q9NUA8 1239 aa16.46■□□□□ 0.23
PAX6-265ENST00000640172 MTHFSP49914 203 aa16.46■□□□□ 0.22
PAX6-265ENST00000640172 CFAP70Q5T0N1 1121 aa16.46■□□□□ 0.22
PAX6-265ENST00000640172 ANP32BQ92688 251 aaKnown RBP16.46■□□□□ 0.22
PAX6-265ENST00000640172 ARHGEF5Q12774 1597 aa16.45■□□□□ 0.22
PAX6-265ENST00000640172 ZNF445P59923 1031 aa16.45■□□□□ 0.22
PAX6-265ENST00000640172 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
PAX6-265ENST00000640172 NSFL1CQ9UNZ2 370 aaKnown RBP16.45■□□□□ 0.22
PAX6-265ENST00000640172 TBC1D9Q6ZT07 1266 aa16.45■□□□□ 0.22
PAX6-265ENST00000640172 FBLN2P98095 1184 aa16.44■□□□□ 0.22
PAX6-265ENST00000640172 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
PAX6-265ENST00000640172 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
PAX6-265ENST00000640172 ERVK-7P63135 1459 aa16.44■□□□□ 0.22
PAX6-265ENST00000640172 CHD1LQ86WJ1 897 aa16.44■□□□□ 0.22
PAX6-265ENST00000640172 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
PAX6-265ENST00000640172 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
PAX6-265ENST00000640172 CEP152O94986 1710 aa16.43■□□□□ 0.22
PAX6-265ENST00000640172 UNC13BO14795 1591 aa16.43■□□□□ 0.22
PAX6-265ENST00000640172 ATF7IPQ6VMQ6 1270 aa16.43■□□□□ 0.22
PAX6-265ENST00000640172 MPNDQ8N594 471 aa16.43■□□□□ 0.22
PAX6-265ENST00000640172 GPT2Q8TD30 523 aa16.43■□□□□ 0.22
PAX6-265ENST00000640172 IBTKQ9P2D0 1353 aaPredicted RBP16.43■□□□□ 0.22
PAX6-265ENST00000640172 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
PAX6-265ENST00000640172 ZKSCAN5Q9Y2L8 839 aa16.43■□□□□ 0.22
PAX6-265ENST00000640172 ABCA8O94911 1581 aa16.42■□□□□ 0.22
PAX6-265ENST00000640172 SMAP1Q8IYB5 467 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms