RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MINK1Q8N4C8 1332 aaPredicted RBP20.24■□□□□ 0.83
TRIM3-215ENST00000639856 METP08581 1390 aa20.23■□□□□ 0.83
TRIM3-215ENST00000639856 CABP2Q9NPB3 220 aa20.23■□□□□ 0.83
TRIM3-215ENST00000639856 POGKQ9P215 609 aa20.23■□□□□ 0.83
TRIM3-215ENST00000639856 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
TRIM3-215ENST00000639856 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
TRIM3-215ENST00000639856 LTKP29376 864 aa20.21■□□□□ 0.83
TRIM3-215ENST00000639856 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
TRIM3-215ENST00000639856 DLC1Q96QB1 1528 aa20.21■□□□□ 0.83
TRIM3-215ENST00000639856 INSRP06213 1382 aa20.2■□□□□ 0.82
TRIM3-215ENST00000639856 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
TRIM3-215ENST00000639856 MYT1Q01538 1121 aa20.2■□□□□ 0.82
TRIM3-215ENST00000639856 WAPLQ7Z5K2 1190 aa20.2■□□□□ 0.82
TRIM3-215ENST00000639856 NPC1L1Q9UHC9 1359 aa20.2■□□□□ 0.82
TRIM3-215ENST00000639856 NSD3Q9BZ95 1437 aa20.19■□□□□ 0.82
TRIM3-215ENST00000639856 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
TRIM3-215ENST00000639856 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
TRIM3-215ENST00000639856 PPP2R1AP30153 589 aa20.18■□□□□ 0.82
TRIM3-215ENST00000639856 SRPK2P78362 688 aaKnown RBP20.18■□□□□ 0.82
TRIM3-215ENST00000639856 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
TRIM3-215ENST00000639856 ABCC11Q96J66 1382 aa20.17■□□□□ 0.82
TRIM3-215ENST00000639856 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
TRIM3-215ENST00000639856 TXNDC2Q86VQ3 553 aa20.15■□□□□ 0.82
TRIM3-215ENST00000639856 SLIT1O75093 1534 aa20.15■□□□□ 0.82
TRIM3-215ENST00000639856 KNDC1Q76NI1 1749 aa20.15■□□□□ 0.82
TRIM3-215ENST00000639856 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
TRIM3-215ENST00000639856 ARHGAP23Q9P227 1491 aa20.14■□□□□ 0.82
TRIM3-215ENST00000639856 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.82
TRIM3-215ENST00000639856 ADAMTSL3P82987 1691 aa20.14■□□□□ 0.81
TRIM3-215ENST00000639856 ANKRD36BQ8N2N9 1353 aa20.13■□□□□ 0.81
TRIM3-215ENST00000639856 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
TRIM3-215ENST00000639856 USP32Q8NFA0 1604 aa20.12■□□□□ 0.81
TRIM3-215ENST00000639856 PDE3BQ13370 1112 aa20.11■□□□□ 0.81
TRIM3-215ENST00000639856 EID1Q9Y6B2 187 aa20.11■□□□□ 0.81
TRIM3-215ENST00000639856 TECPR2O15040 1411 aa20.11■□□□□ 0.81
TRIM3-215ENST00000639856 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
TRIM3-215ENST00000639856 CPS1P31327 1500 aa20.11■□□□□ 0.81
TRIM3-215ENST00000639856 ATAD2Q6PL18 1390 aa20.1■□□□□ 0.81
TRIM3-215ENST00000639856 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
TRIM3-215ENST00000639856 A0A1W2PP64 1363 aa20.1■□□□□ 0.81
TRIM3-215ENST00000639856 MED14O60244 1454 aa20.09■□□□□ 0.81
TRIM3-215ENST00000639856 THEMISQ8N1K5 641 aaPredicted RBP20.09■□□□□ 0.81
TRIM3-215ENST00000639856 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
TRIM3-215ENST00000639856 CD163L1Q9NR16 1453 aa20.08■□□□□ 0.8
TRIM3-215ENST00000639856 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
TRIM3-215ENST00000639856 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
TRIM3-215ENST00000639856 SALL2Q9Y467 1007 aaPredicted RBP20.06■□□□□ 0.8
TRIM3-215ENST00000639856 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
TRIM3-215ENST00000639856 CGNL1Q0VF96 1302 aa20.06■□□□□ 0.8
TRIM3-215ENST00000639856 PTPRUQ92729 1446 aa20.06■□□□□ 0.8
TRIM3-215ENST00000639856 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
TRIM3-215ENST00000639856 MORC1Q86VD1 984 aa20.04■□□□□ 0.8
TRIM3-215ENST00000639856 CABP1Q9NZU7 370 aa20.04■□□□□ 0.8
TRIM3-215ENST00000639856 SIRT1Q96EB6 747 aa20.03■□□□□ 0.8
TRIM3-215ENST00000639856 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
TRIM3-215ENST00000639856 RBM19Q9Y4C8 960 aaKnown RBP20.03■□□□□ 0.8
TRIM3-215ENST00000639856 WASLO00401 505 aaPredicted RBP20.03■□□□□ 0.8
TRIM3-215ENST00000639856 ZNF142P52746 1687 aaPredicted RBP20.02■□□□□ 0.8
TRIM3-215ENST00000639856 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
TRIM3-215ENST00000639856 TERF2IPQ9NYB0 399 aa20.01■□□□□ 0.79
TRIM3-215ENST00000639856 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.01■□□□□ 0.79
TRIM3-215ENST00000639856 RCAN3Q9UKA8 241 aa20■□□□□ 0.79
TRIM3-215ENST00000639856 TBX22Q9Y458 520 aa19.99■□□□□ 0.79
TRIM3-215ENST00000639856 CDCA7LQ96GN5 454 aa19.99■□□□□ 0.79
TRIM3-215ENST00000639856 NSD2O96028 1365 aa19.98■□□□□ 0.79
TRIM3-215ENST00000639856 DIP2AQ14689 1571 aa19.98■□□□□ 0.79
TRIM3-215ENST00000639856 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
TRIM3-215ENST00000639856 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
TRIM3-215ENST00000639856 RRP1P56182 461 aaKnown RBP19.97■□□□□ 0.79
TRIM3-215ENST00000639856 AMOTL2Q9Y2J4 779 aa19.97■□□□□ 0.79
TRIM3-215ENST00000639856 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
TRIM3-215ENST00000639856 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
TRIM3-215ENST00000639856 PPIP5K1Q6PFW1 1433 aa19.97■□□□□ 0.79
TRIM3-215ENST00000639856 ATP7BP35670 1465 aa19.96■□□□□ 0.79
TRIM3-215ENST00000639856 ADGRB2O60241 1585 aa19.96■□□□□ 0.79
TRIM3-215ENST00000639856 ANKRD26Q9UPS8 1709 aa19.95■□□□□ 0.78
TRIM3-215ENST00000639856 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
TRIM3-215ENST00000639856 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.78
TRIM3-215ENST00000639856 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
TRIM3-215ENST00000639856 FYB1O15117 783 aa19.94■□□□□ 0.78
TRIM3-215ENST00000639856 PRR36Q9H6K5 1346 aa19.94■□□□□ 0.78
TRIM3-215ENST00000639856 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
TRIM3-215ENST00000639856 CCDC136Q96JN2 1154 aa19.94■□□□□ 0.78
TRIM3-215ENST00000639856 SHPRHQ149N8 1683 aa19.94■□□□□ 0.78
TRIM3-215ENST00000639856 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
TRIM3-215ENST00000639856 MTHFSP49914 203 aa19.92■□□□□ 0.78
TRIM3-215ENST00000639856 CPSF1Q10570 1443 aaKnown RBP19.91■□□□□ 0.78
TRIM3-215ENST00000639856 CDC42BPGQ6DT37 1551 aa19.91■□□□□ 0.78
TRIM3-215ENST00000639856 ANKLE2Q86XL3 938 aa19.91■□□□□ 0.78
TRIM3-215ENST00000639856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.91■□□□□ 0.78
TRIM3-215ENST00000639856 CCDC146Q8IYE0 955 aa19.9■□□□□ 0.78
TRIM3-215ENST00000639856 CCDC61Q9Y6R9 512 aa19.9■□□□□ 0.78
TRIM3-215ENST00000639856 NUTM2FA1L443 756 aa19.9■□□□□ 0.78
TRIM3-215ENST00000639856 ZNF521Q96K83 1311 aa19.89■□□□□ 0.77
TRIM3-215ENST00000639856 TOPAZ1Q8N9V7 1692 aa19.89■□□□□ 0.77
TRIM3-215ENST00000639856 KCNA6P17658 529 aa19.88■□□□□ 0.77
TRIM3-215ENST00000639856 AKAP12Q02952 1782 aa19.88■□□□□ 0.77
TRIM3-215ENST00000639856 ITSN1Q15811 1721 aa19.88■□□□□ 0.77
TRIM3-215ENST00000639856 MON2Q7Z3U7 1717 aa19.88■□□□□ 0.77
TRIM3-215ENST00000639856 EDC4Q6P2E9 1401 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms