RNA–Protein interactions for RNA: ENST00000639760.1

SMARCA2-266, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-266ENST00000639760 NOLC1Q14978 699 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMARCA2-266ENST00000639760 CARD11Q9BXL7 1154 aa13.11□□□□□ -0.31
SMARCA2-266ENST00000639760 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
SMARCA2-266ENST00000639760 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
SMARCA2-266ENST00000639760 EFCAB5A4FU69 1503 aa13.11□□□□□ -0.31
SMARCA2-266ENST00000639760 TRMT2AQ8IZ69 625 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-266ENST00000639760 BCCIPQ9P287 314 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMARCA2-266ENST00000639760 IGF1RP08069 1367 aa13.1□□□□□ -0.31
SMARCA2-266ENST00000639760 ANKRD30AQ9BXX3 1397 aa13.1□□□□□ -0.31
SMARCA2-266ENST00000639760 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
SMARCA2-266ENST00000639760 GEMIN8Q9NWZ8 242 aaKnown RBP13.09□□□□□ -0.31
SMARCA2-266ENST00000639760 ST20-MTHFSA0A0A6YYL1 179 aa13.09□□□□□ -0.31
SMARCA2-266ENST00000639760 CLGNO14967 610 aa13.09□□□□□ -0.31
SMARCA2-266ENST00000639760 FKBP5Q13451 457 aaPredicted RBP13.09□□□□□ -0.31
SMARCA2-266ENST00000639760 CFTRP13569 1480 aa13.09□□□□□ -0.31
SMARCA2-266ENST00000639760 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 PANK1Q8TE04 598 aa13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 SOX12O15370 315 aa13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 PSEN1P49768 467 aa13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
SMARCA2-266ENST00000639760 TERF2Q15554 542 aa13.07□□□□□ -0.32
SMARCA2-266ENST00000639760 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
SMARCA2-266ENST00000639760 MCTP1Q6DN14 999 aa13.07□□□□□ -0.32
SMARCA2-266ENST00000639760 DIAPH3Q9NSV4 1193 aa13.07□□□□□ -0.32
SMARCA2-266ENST00000639760 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
SMARCA2-266ENST00000639760 EHBP1L1Q8N3D4 1523 aa13.07□□□□□ -0.32
SMARCA2-266ENST00000639760 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
SMARCA2-266ENST00000639760 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 NGEFQ8N5V2 710 aa13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 LMBRD1Q9NUN5 540 aa13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 CTIFO43310 598 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
SMARCA2-266ENST00000639760 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
SMARCA2-266ENST00000639760 ZBTB9Q96C00 473 aa13.05□□□□□ -0.32
SMARCA2-266ENST00000639760 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
SMARCA2-266ENST00000639760 CTNNA3Q9UI47 895 aa13.05□□□□□ -0.32
SMARCA2-266ENST00000639760 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 APPP05067 770 aa13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 AXDND1Q5T1B0 1012 aaPredicted RBP13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 ARHGEF11O15085 1522 aa13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 RIOK3O14730 519 aaKnown RBP13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 FEZ2Q9UHY8 353 aaPredicted RBP13.04□□□□□ -0.32
SMARCA2-266ENST00000639760 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
SMARCA2-266ENST00000639760 SHROOM2Q13796 1616 aa13.03□□□□□ -0.32
SMARCA2-266ENST00000639760 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
SMARCA2-266ENST00000639760 KCNG1Q9UIX4 513 aa13.03□□□□□ -0.32
SMARCA2-266ENST00000639760 PLXNC1O60486 1568 aa13.02□□□□□ -0.32
SMARCA2-266ENST00000639760 SYCE3A1L190 88 aa13.02□□□□□ -0.32
SMARCA2-266ENST00000639760 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.32
SMARCA2-266ENST00000639760 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.32
SMARCA2-266ENST00000639760 AK9Q5TCS8 1911 aa13.02□□□□□ -0.33
SMARCA2-266ENST00000639760 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.33
SMARCA2-266ENST00000639760 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
SMARCA2-266ENST00000639760 RNF214Q8ND24 703 aa13.02□□□□□ -0.33
SMARCA2-266ENST00000639760 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
SMARCA2-266ENST00000639760 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 ERICH4A6NGS2 130 aa13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 FAM193AP78312 1265 aa13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 SYCP1Q15431 976 aa13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 CNPY4Q8N129 248 aa13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 C17orf53Q8N3J3 647 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 CD2BP2O95400 341 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 FAM135AQ9P2D6 1515 aa13.01□□□□□ -0.33
SMARCA2-266ENST00000639760 TNNT3P45378 269 aaPredicted RBP13□□□□□ -0.33
SMARCA2-266ENST00000639760 NUCB2P80303 420 aa13□□□□□ -0.33
SMARCA2-266ENST00000639760 NCBP1Q09161 790 aaKnown RBP13□□□□□ -0.33
SMARCA2-266ENST00000639760 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
SMARCA2-266ENST00000639760 KRT222Q8N1A0 295 aa13□□□□□ -0.33
SMARCA2-266ENST00000639760 TMEM63CQ9P1W3 806 aa13□□□□□ -0.33
SMARCA2-266ENST00000639760 KIF2CQ99661 725 aa12.99□□□□□ -0.33
SMARCA2-266ENST00000639760 ROCK1Q13464 1354 aa12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 KIF16BQ96L93 1317 aa12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 PZPP20742 1482 aa12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 PRPF40AO75400 957 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 TSPY26PQ9H489 355 aa12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 CAMSAP2Q08AD1 1489 aa12.98□□□□□ -0.33
SMARCA2-266ENST00000639760 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
SMARCA2-266ENST00000639760 CYP2E1P05181 493 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-266ENST00000639760 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
SMARCA2-266ENST00000639760 KIF18AQ8NI77 898 aa12.97□□□□□ -0.33
SMARCA2-266ENST00000639760 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.33
SMARCA2-266ENST00000639760 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.33
SMARCA2-266ENST00000639760 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.33
SMARCA2-266ENST00000639760 MPNDQ8N594 471 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms