RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
KCNQ3-208ENST00000639496 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
KCNQ3-208ENST00000639496 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
KCNQ3-208ENST00000639496 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
KCNQ3-208ENST00000639496 HOOK1Q9UJC3 728 aaKnown RBP12.51□□□□□ -0.41
KCNQ3-208ENST00000639496 SMG6Q86US8 1419 aaKnown RBP12.51□□□□□ -0.41
KCNQ3-208ENST00000639496 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 IPO7O95373 1038 aaKnown RBP12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 GNAI3P08754 354 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 RRP1P56182 461 aaKnown RBP12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 CCDC30Q5VVM6 783 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 WASHC4Q2M389 1173 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 PLEKHH2Q8IVE3 1493 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
KCNQ3-208ENST00000639496 FOXD4L5Q5VV16 416 aaPredicted RBP12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 GOLGA6L1Q8N7Z2 621 aa12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 FOXD4L4Q8WXT5 416 aaPredicted RBP12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 CLASRPQ8N2M8 674 aaKnown RBP12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 PRAM1Q96QH2 718 aa12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 R3HCC1Q9Y3T6 440 aaKnown RBP12.49□□□□□ -0.41
KCNQ3-208ENST00000639496 MTHFSP49914 203 aa12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 KRI1Q8N9T8 703 aaKnown RBP12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 PLIN1O60240 522 aa12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
KCNQ3-208ENST00000639496 CCAR1Q8IX12 1150 aaKnown RBP12.47□□□□□ -0.41
KCNQ3-208ENST00000639496 PNISRQ8TF01 805 aaKnown RBP12.47□□□□□ -0.41
KCNQ3-208ENST00000639496 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
KCNQ3-208ENST00000639496 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
KCNQ3-208ENST00000639496 CRBNQ96SW2 442 aa12.47□□□□□ -0.41
KCNQ3-208ENST00000639496 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
KCNQ3-208ENST00000639496 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.41
KCNQ3-208ENST00000639496 XBP1P17861 261 aa12.46□□□□□ -0.41
KCNQ3-208ENST00000639496 PPP1R1BQ9UD71 204 aaPredicted RBP12.46□□□□□ -0.41
KCNQ3-208ENST00000639496 CASKIN1Q8WXD9 1431 aa12.46□□□□□ -0.41
KCNQ3-208ENST00000639496 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.41
KCNQ3-208ENST00000639496 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
KCNQ3-208ENST00000639496 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
KCNQ3-208ENST00000639496 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.42
KCNQ3-208ENST00000639496 SKOR2Q2VWA4 1001 aaPredicted RBP12.46□□□□□ -0.42
KCNQ3-208ENST00000639496 FAM177BA6PVY3 158 aa12.45□□□□□ -0.42
KCNQ3-208ENST00000639496 IKQ13123 557 aaPredicted RBP12.45□□□□□ -0.42
KCNQ3-208ENST00000639496 BRMS1Q9HCU9 246 aa12.45□□□□□ -0.42
KCNQ3-208ENST00000639496 CABP4P57796 275 aa12.45□□□□□ -0.42
KCNQ3-208ENST00000639496 SLC3A2P08195 630 aaKnown RBP12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 EXOC6Q8TAG9 804 aa12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 SLC26A8Q96RN1 970 aa12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 PRDM2Q13029 1718 aa12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 FYB1O15117 783 aa12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 RPGRIP1LQ68CZ1 1315 aa12.44□□□□□ -0.42
KCNQ3-208ENST00000639496 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 DDX54Q8TDD1 881 aaKnown RBP12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 SMC3Q9UQE7 1217 aa12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 NCOA2Q15596 1464 aa12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 CCDC70Q6NSX1 233 aa12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 ZNF530Q6P9A1 599 aaPredicted RBP12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 SURF6O75683 361 aaKnown RBP12.43□□□□□ -0.42
KCNQ3-208ENST00000639496 TCP11L2Q8N4U5 519 aa12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 KIF7Q2M1P5 1343 aa12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 PDE4AP27815 886 aa12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 ERC1Q8IUD2 1116 aa12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 CCDC7Q96M83 1385 aa12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 FSD1Q9BTV5 496 aa12.42□□□□□ -0.42
KCNQ3-208ENST00000639496 PSMA5P28066 241 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 DEKP35659 375 aaKnown RBP12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 PIP4K2BP78356 416 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 CDK19Q9BWU1 502 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 NINLQ9Y2I6 1382 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 CNTROBQ8N137 903 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 LNPKQ9C0E8 428 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 VPS37CA5D8V6 355 aaPredicted RBP12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 LRRC9Q6ZRR7 1453 aa12.41□□□□□ -0.42
KCNQ3-208ENST00000639496 HIP1O00291 1037 aa12.4□□□□□ -0.42
KCNQ3-208ENST00000639496 CCDC73Q6ZRK6 1079 aa12.4□□□□□ -0.42
KCNQ3-208ENST00000639496 CABP1Q9NZU7 370 aa12.4□□□□□ -0.42
KCNQ3-208ENST00000639496 SULT6B1Q6IMI4 303 aa12.4□□□□□ -0.42
KCNQ3-208ENST00000639496 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.43
KCNQ3-208ENST00000639496 RTEL1-TNFRSF6BF6WH68 1400 aa12.39□□□□□ -0.43
KCNQ3-208ENST00000639496 ANKRD30BQ9BXX2 1392 aa12.39□□□□□ -0.43
KCNQ3-208ENST00000639496 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
KCNQ3-208ENST00000639496 CFTRP13569 1480 aa12.38□□□□□ -0.43
KCNQ3-208ENST00000639496 TWISTNBQ3B726 338 aaPredicted RBP12.38□□□□□ -0.43
KCNQ3-208ENST00000639496 TROQ12816 1431 aaPredicted RBP12.38□□□□□ -0.43
KCNQ3-208ENST00000639496 NUCB2P80303 420 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms