RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 NINLQ9Y2I6 1382 aa22.23■■□□□ 1.15
HCG27-205ENST00000638546 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
HCG27-205ENST00000638546 SRPK2P78362 688 aaKnown RBP22.21■■□□□ 1.15
HCG27-205ENST00000638546 SMG6Q86US8 1419 aaKnown RBP22.21■■□□□ 1.15
HCG27-205ENST00000638546 ANKRD36BQ8N2N9 1353 aa22.2■■□□□ 1.15
HCG27-205ENST00000638546 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.14
HCG27-205ENST00000638546 ATAD2Q6PL18 1390 aa22.2■■□□□ 1.14
HCG27-205ENST00000638546 UBR1Q8IWV7 1749 aa22.19■■□□□ 1.14
HCG27-205ENST00000638546 SIRT1Q96EB6 747 aa22.18■■□□□ 1.14
HCG27-205ENST00000638546 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
HCG27-205ENST00000638546 SETD1AO15047 1707 aaKnown RBP22.18■■□□□ 1.14
HCG27-205ENST00000638546 NRXN3Q9Y4C0 1643 aa22.17■■□□□ 1.14
HCG27-205ENST00000638546 BCANQ96GW7 911 aa22.17■■□□□ 1.14
HCG27-205ENST00000638546 METP08581 1390 aa22.17■■□□□ 1.14
HCG27-205ENST00000638546 WDR43Q15061 677 aaKnown RBP eCLIP22.17■■□□□ 1.14
HCG27-205ENST00000638546 MORC1Q86VD1 984 aa22.17■■□□□ 1.14
HCG27-205ENST00000638546 CDK19Q9BWU1 502 aa22.17■■□□□ 1.14
HCG27-205ENST00000638546 NUDCQ9Y266 331 aa22.17■■□□□ 1.14
HCG27-205ENST00000638546 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
HCG27-205ENST00000638546 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
HCG27-205ENST00000638546 RIMS1Q86UR5 1692 aaKnown RBP22.15■■□□□ 1.14
HCG27-205ENST00000638546 ADAMTS8Q9UP79 889 aa22.14■■□□□ 1.14
HCG27-205ENST00000638546 C3P01024 1663 aa22.14■■□□□ 1.13
HCG27-205ENST00000638546 USP32Q8NFA0 1604 aa22.14■■□□□ 1.13
HCG27-205ENST00000638546 NSD2O96028 1365 aa22.13■■□□□ 1.13
HCG27-205ENST00000638546 PLEKHG1Q9ULL1 1385 aa22.13■■□□□ 1.13
HCG27-205ENST00000638546 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
HCG27-205ENST00000638546 ILDR1Q86SU0 546 aaPredicted RBP22.13■■□□□ 1.13
HCG27-205ENST00000638546 TXNDC2Q86VQ3 553 aa22.13■■□□□ 1.13
HCG27-205ENST00000638546 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
HCG27-205ENST00000638546 EID1Q9Y6B2 187 aa22.13■■□□□ 1.13
HCG27-205ENST00000638546 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
HCG27-205ENST00000638546 LTKP29376 864 aa22.12■■□□□ 1.13
HCG27-205ENST00000638546 PDE3BQ13370 1112 aa22.12■■□□□ 1.13
HCG27-205ENST00000638546 PLEKHH1Q9ULM0 1364 aa22.12■■□□□ 1.13
HCG27-205ENST00000638546 TECPR2O15040 1411 aa22.11■■□□□ 1.13
HCG27-205ENST00000638546 FAM135BQ49AJ0 1406 aa22.11■■□□□ 1.13
HCG27-205ENST00000638546 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
HCG27-205ENST00000638546 ADAMTS13Q76LX8 1427 aa22.09■■□□□ 1.13
HCG27-205ENST00000638546 A0A1W2PP64 1363 aa22.09■■□□□ 1.13
HCG27-205ENST00000638546 POLR3AO14802 1390 aaPredicted RBP22.08■■□□□ 1.13
HCG27-205ENST00000638546 HDGFL2Q7Z4V5 671 aaPredicted RBP22.08■■□□□ 1.13
HCG27-205ENST00000638546 ARHGAP23Q9P227 1491 aa22.08■■□□□ 1.12
HCG27-205ENST00000638546 SLIT1O75093 1534 aa22.07■■□□□ 1.12
HCG27-205ENST00000638546 ERICH6BQ5W0A0 696 aa22.06■■□□□ 1.12
HCG27-205ENST00000638546 WASLO00401 505 aaPredicted RBP22.06■■□□□ 1.12
HCG27-205ENST00000638546 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
HCG27-205ENST00000638546 SALL2Q9Y467 1007 aaPredicted RBP22.06■■□□□ 1.12
HCG27-205ENST00000638546 KNDC1Q76NI1 1749 aa22.05■■□□□ 1.12
HCG27-205ENST00000638546 MED14O60244 1454 aa22.04■■□□□ 1.12
HCG27-205ENST00000638546 CD163L1Q9NR16 1453 aa22.04■■□□□ 1.12
HCG27-205ENST00000638546 CPS1P31327 1500 aa22.03■■□□□ 1.12
HCG27-205ENST00000638546 TNNT2P45379 298 aaPredicted RBP22.02■■□□□ 1.12
HCG27-205ENST00000638546 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
HCG27-205ENST00000638546 TBX22Q9Y458 520 aa22.02■■□□□ 1.11
HCG27-205ENST00000638546 CFAP53Q96M91 514 aa22■■□□□ 1.11
HCG27-205ENST00000638546 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
HCG27-205ENST00000638546 IRX6P78412 446 aaPredicted RBP21.99■■□□□ 1.11
HCG27-205ENST00000638546 SLC26A8Q96RN1 970 aa21.99■■□□□ 1.11
HCG27-205ENST00000638546 ATP7BP35670 1465 aa21.99■■□□□ 1.11
HCG27-205ENST00000638546 RNF123Q5XPI4 1314 aa21.99■■□□□ 1.11
HCG27-205ENST00000638546 FYB1O15117 783 aa21.98■■□□□ 1.11
HCG27-205ENST00000638546 MTHFSP49914 203 aa21.98■■□□□ 1.11
HCG27-205ENST00000638546 NUDT16Q96DE0 195 aaKnown RBP21.97■■□□□ 1.11
HCG27-205ENST00000638546 GGNBP2Q9H3C7 697 aa21.97■■□□□ 1.11
HCG27-205ENST00000638546 CCDC146Q8IYE0 955 aa21.95■■□□□ 1.1
HCG27-205ENST00000638546 NGEFQ8N5V2 710 aa21.95■■□□□ 1.1
HCG27-205ENST00000638546 CDCA7LQ96GN5 454 aa21.95■■□□□ 1.1
HCG27-205ENST00000638546 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
HCG27-205ENST00000638546 PPIP5K1Q6PFW1 1433 aa21.94■■□□□ 1.1
HCG27-205ENST00000638546 CCDC61Q9Y6R9 512 aa21.94■■□□□ 1.1
HCG27-205ENST00000638546 AMOTL2Q9Y2J4 779 aa21.93■■□□□ 1.1
HCG27-205ENST00000638546 DIP2AQ14689 1571 aa21.92■■□□□ 1.1
HCG27-205ENST00000638546 CEP170BQ9Y4F5 1589 aaPredicted RBP21.92■■□□□ 1.1
HCG27-205ENST00000638546 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
HCG27-205ENST00000638546 CPSF1Q10570 1443 aaKnown RBP21.92■■□□□ 1.1
HCG27-205ENST00000638546 PPP4R2Q9NY27 417 aa21.91■■□□□ 1.1
HCG27-205ENST00000638546 RCAN3Q9UKA8 241 aa21.91■■□□□ 1.1
HCG27-205ENST00000638546 SETD1BQ9UPS6 1966 aaKnown RBP21.9■■□□□ 1.1
HCG27-205ENST00000638546 APAF1O14727 1248 aa21.9■■□□□ 1.1
HCG27-205ENST00000638546 ADGRB2O60241 1585 aa21.89■■□□□ 1.09
HCG27-205ENST00000638546 GOLGA2Q08379 1002 aa21.88■■□□□ 1.09
HCG27-205ENST00000638546 EDC4Q6P2E9 1401 aaKnown RBP21.88■■□□□ 1.09
HCG27-205ENST00000638546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.88■■□□□ 1.09
HCG27-205ENST00000638546 RUNDC1Q96C34 613 aa21.88■■□□□ 1.09
HCG27-205ENST00000638546 ZNF692Q9BU19 519 aaPredicted RBP21.88■■□□□ 1.09
HCG27-205ENST00000638546 PRR36Q9H6K5 1346 aa21.87■■□□□ 1.09
HCG27-205ENST00000638546 PTCH1Q13635 1447 aa21.87■■□□□ 1.09
HCG27-205ENST00000638546 ANKLE2Q86XL3 938 aa21.87■■□□□ 1.09
HCG27-205ENST00000638546 ANKRD26Q9UPS8 1709 aa21.86■■□□□ 1.09
HCG27-205ENST00000638546 SHPRHQ149N8 1683 aa21.86■■□□□ 1.09
HCG27-205ENST00000638546 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
HCG27-205ENST00000638546 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.85■■□□□ 1.09
HCG27-205ENST00000638546 CDC42BPGQ6DT37 1551 aa21.85■■□□□ 1.09
HCG27-205ENST00000638546 NCKAP5LQ9HCH0 1330 aa21.84■■□□□ 1.09
HCG27-205ENST00000638546 PLEKHG3A1L390 1219 aa21.83■■□□□ 1.08
HCG27-205ENST00000638546 RRP1P56182 461 aaKnown RBP21.83■■□□□ 1.08
HCG27-205ENST00000638546 SLFN5Q08AF3 891 aa21.83■■□□□ 1.08
HCG27-205ENST00000638546 DUSP27Q5VZP5 1158 aa21.82■■□□□ 1.08
HCG27-205ENST00000638546 KIF20BQ96Q89 1820 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms