RNA–Protein interactions for RNA: ENST00000638473.1

SCN3A-208, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-208ENST00000638473 TMX4Q9H1E5 349 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-208ENST00000638473 PREX2Q70Z35 1606 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 TTC37Q6PGP7 1564 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 TSPYL4Q9UJ04 414 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 STRN4Q9NRL3 753 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 ADAMTS8Q9UP79 889 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 ATAD2Q6PL18 1390 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 SAMD9LQ8IVG5 1584 aa5.5□□□□□ -1.53
SCN3A-208ENST00000638473 NCLP19338 710 aaKnown RBP5.5□□□□□ -1.53
SCN3A-208ENST00000638473 RBM33Q96EV2 1170 aaKnown RBP5.5□□□□□ -1.53
SCN3A-208ENST00000638473 AMOTL2Q9Y2J4 779 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 MCCP23508 829 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 SCAF11Q99590 1463 aaKnown RBP5.49□□□□□ -1.53
SCN3A-208ENST00000638473 FGD1P98174 961 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 GPATCH3Q96I76 525 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 MSH5O43196 834 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 ZFYVE16Q7Z3T8 1539 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 ERCC6L2Q5T890 1561 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 RRP1P56182 461 aaKnown RBP5.49□□□□□ -1.53
SCN3A-208ENST00000638473 RRS1Q15050 365 aaKnown RBP5.49□□□□□ -1.53
SCN3A-208ENST00000638473 UHRF1BP1LA0JNW5 1464 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 GORABQ5T7V8 394 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 CRBNQ96SW2 442 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
SCN3A-208ENST00000638473 TCERG1O14776 1098 aaKnown RBP5.49□□□□□ -1.53
SCN3A-208ENST00000638473 ATP10AO60312 1499 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 HMMRO75330 724 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 ARHGEF5Q12774 1597 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 TRIM6-TRIM34B2RNG4 842 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 ERICH6BQ5W0A0 696 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 ZKSCAN2Q63HK3 967 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 CFAP44Q96MT7 982 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 RIMS2Q9UQ26 1411 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 CDC42BPAQ5VT25 1732 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 G3V3G9 751 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 GTF2E1P29083 439 aaPredicted RBP5.48□□□□□ -1.53
SCN3A-208ENST00000638473 DCAF8Q5TAQ9 597 aa5.48□□□□□ -1.53
SCN3A-208ENST00000638473 HDAC5Q9UQL6 1122 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 PRKAR2BP31323 418 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 GNAI1P63096 354 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 SPRYD3Q8NCJ5 442 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 PLEKHO1Q53GL0 409 aaPredicted RBP5.47□□□□□ -1.53
SCN3A-208ENST00000638473 C14orf93Q9H972 538 aaKnown RBP5.47□□□□□ -1.53
SCN3A-208ENST00000638473 KIAA1211Q6ZU35 1233 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 HSCBQ8IWL3 235 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 ADGRL2O95490 1459 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 GOLGA6L22H0YM25 854 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 TOM1L2Q6ZVM7 507 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 GAS2L2Q8NHY3 880 aa5.47□□□□□ -1.53
SCN3A-208ENST00000638473 WASLO00401 505 aaPredicted RBP5.46□□□□□ -1.53
SCN3A-208ENST00000638473 EXOC6Q8TAG9 804 aa5.46□□□□□ -1.53
SCN3A-208ENST00000638473 ZMYM3Q14202 1370 aa5.46□□□□□ -1.53
SCN3A-208ENST00000638473 DISP3Q9P2K9 1392 aa5.46□□□□□ -1.53
SCN3A-208ENST00000638473 TATP17735 454 aaPredicted RBP5.46□□□□□ -1.53
SCN3A-208ENST00000638473 SULT6B1Q6IMI4 303 aa5.46□□□□□ -1.54
SCN3A-208ENST00000638473 COG6Q9Y2V7 657 aa5.46□□□□□ -1.54
SCN3A-208ENST00000638473 RALGAPBQ86X10 1494 aa5.46□□□□□ -1.54
SCN3A-208ENST00000638473 NEXNQ0ZGT2 675 aa5.46□□□□□ -1.54
SCN3A-208ENST00000638473 AIMP1Q12904 312 aaKnown RBP5.46□□□□□ -1.54
SCN3A-208ENST00000638473 C11orf95C9JLR9 678 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-208ENST00000638473 DDX58O95786 925 aaKnown RBP5.46□□□□□ -1.54
SCN3A-208ENST00000638473 C9orf78Q9NZ63 289 aaPredicted RBP5.46□□□□□ -1.54
SCN3A-208ENST00000638473 ADCY10Q96PN6 1610 aa5.46□□□□□ -1.54
SCN3A-208ENST00000638473 PZPP20742 1482 aa5.46□□□□□ -1.54
SCN3A-208ENST00000638473 KIF1BO60333 1816 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 ANKRD45Q5TZF3 282 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 CCDC61Q9Y6R9 512 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 SHROOM2Q13796 1616 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 TCP11L2Q8N4U5 519 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 NEO1Q92859 1461 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 NCKAP5LQ9HCH0 1330 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 MFAP1P55081 439 aaKnown RBP5.45□□□□□ -1.54
SCN3A-208ENST00000638473 PHF23Q9BUL5 403 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-208ENST00000638473 HECW2Q9P2P5 1572 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 FKBP5Q13451 457 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-208ENST00000638473 RIC3Q7Z5B4 369 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 PRAG1Q86YV5 1406 aa5.45□□□□□ -1.54
SCN3A-208ENST00000638473 DDX54Q8TDD1 881 aaKnown RBP5.45□□□□□ -1.54
SCN3A-208ENST00000638473 CABP4P57796 275 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 ZC3H6P61129 1189 aaKnown RBP5.44□□□□□ -1.54
SCN3A-208ENST00000638473 DZIP1LQ8IYY4 767 aaKnown RBP5.44□□□□□ -1.54
SCN3A-208ENST00000638473 SPG7Q9UQ90 795 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 ABCC1P33527 1531 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 AMER1Q5JTC6 1135 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-208ENST00000638473 ISY1Q9ULR0 285 aaKnown RBP5.44□□□□□ -1.54
SCN3A-208ENST00000638473 KDM6BO15054 1643 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 NME9Q86XW9 330 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 RBM42Q9BTD8 480 aaKnown RBP5.44□□□□□ -1.54
SCN3A-208ENST00000638473 FRAT2O75474 233 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-208ENST00000638473 CENPQQ7L2Z9 268 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-208ENST00000638473 CDCA7LQ96GN5 454 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 DDX19BQ9UMR2 479 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 KCNH5Q8NCM2 988 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 LRRIQ1Q96JM4 1722 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 RILPL2Q969X0 211 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 CROCC2H7BZ55 1655 aa5.44□□□□□ -1.54
SCN3A-208ENST00000638473 CCDC30Q5VVM6 783 aa5.43□□□□□ -1.54
SCN3A-208ENST00000638473 API5Q9BZZ5 524 aaKnown RBP5.43□□□□□ -1.54
SCN3A-208ENST00000638473 NOP58Q9Y2X3 529 aaKnown RBP5.43□□□□□ -1.54
SCN3A-208ENST00000638473 LRPPRCP42704 1394 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 1355.1 ms