RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 METP08581 1390 aa16.56■□□□□ 0.24
CACNA1D-228ENST00000638120 PLEKHG1Q9ULL1 1385 aa16.56■□□□□ 0.24
CACNA1D-228ENST00000638120 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
CACNA1D-228ENST00000638120 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
CACNA1D-228ENST00000638120 CPS1P31327 1500 aa16.55■□□□□ 0.24
CACNA1D-228ENST00000638120 TECPR2O15040 1411 aa16.55■□□□□ 0.24
CACNA1D-228ENST00000638120 ADAMTS13Q76LX8 1427 aa16.55■□□□□ 0.24
CACNA1D-228ENST00000638120 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
CACNA1D-228ENST00000638120 SLC12A5Q9H2X9 1139 aa16.54■□□□□ 0.24
CACNA1D-228ENST00000638120 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
CACNA1D-228ENST00000638120 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
CACNA1D-228ENST00000638120 MINK1Q8N4C8 1332 aaPredicted RBP16.54■□□□□ 0.24
CACNA1D-228ENST00000638120 CABP2Q9NPB3 220 aa16.53■□□□□ 0.24
CACNA1D-228ENST00000638120 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
CACNA1D-228ENST00000638120 FAM135BQ49AJ0 1406 aa16.52■□□□□ 0.24
CACNA1D-228ENST00000638120 CEP170BQ9Y4F5 1589 aaPredicted RBP16.52■□□□□ 0.24
CACNA1D-228ENST00000638120 INSRP06213 1382 aa16.52■□□□□ 0.24
CACNA1D-228ENST00000638120 LTKP29376 864 aa16.52■□□□□ 0.23
CACNA1D-228ENST00000638120 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
CACNA1D-228ENST00000638120 MED14O60244 1454 aa16.51■□□□□ 0.23
CACNA1D-228ENST00000638120 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
CACNA1D-228ENST00000638120 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
CACNA1D-228ENST00000638120 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
CACNA1D-228ENST00000638120 SIRT1Q96EB6 747 aa16.49■□□□□ 0.23
CACNA1D-228ENST00000638120 EID1Q9Y6B2 187 aa16.49■□□□□ 0.23
CACNA1D-228ENST00000638120 ZNF142P52746 1687 aaPredicted RBP16.49■□□□□ 0.23
CACNA1D-228ENST00000638120 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
CACNA1D-228ENST00000638120 WAPLQ7Z5K2 1190 aa16.48■□□□□ 0.23
CACNA1D-228ENST00000638120 BCANQ96GW7 911 aa16.48■□□□□ 0.23
CACNA1D-228ENST00000638120 DIP2AQ14689 1571 aa16.48■□□□□ 0.23
CACNA1D-228ENST00000638120 A0A1W2PP64 1363 aa16.47■□□□□ 0.23
CACNA1D-228ENST00000638120 BLMP54132 1417 aaPredicted RBP16.47■□□□□ 0.23
CACNA1D-228ENST00000638120 NSD2O96028 1365 aa16.47■□□□□ 0.23
CACNA1D-228ENST00000638120 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
CACNA1D-228ENST00000638120 CGNL1Q0VF96 1302 aa16.46■□□□□ 0.23
CACNA1D-228ENST00000638120 CD163L1Q9NR16 1453 aa16.46■□□□□ 0.23
CACNA1D-228ENST00000638120 ADGRB2O60241 1585 aa16.45■□□□□ 0.22
CACNA1D-228ENST00000638120 ATP7BP35670 1465 aa16.43■□□□□ 0.22
CACNA1D-228ENST00000638120 ROBO2Q9HCK4 1378 aa16.43■□□□□ 0.22
CACNA1D-228ENST00000638120 ANKRD26Q9UPS8 1709 aa16.43■□□□□ 0.22
CACNA1D-228ENST00000638120 TERF2IPQ9NYB0 399 aa16.42■□□□□ 0.22
CACNA1D-228ENST00000638120 PTPRUQ92729 1446 aa16.42■□□□□ 0.22
CACNA1D-228ENST00000638120 TBX22Q9Y458 520 aa16.42■□□□□ 0.22
CACNA1D-228ENST00000638120 WASLO00401 505 aaPredicted RBP16.41■□□□□ 0.22
CACNA1D-228ENST00000638120 MORC1Q86VD1 984 aa16.41■□□□□ 0.22
CACNA1D-228ENST00000638120 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
CACNA1D-228ENST00000638120 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
CACNA1D-228ENST00000638120 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
CACNA1D-228ENST00000638120 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
CACNA1D-228ENST00000638120 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
CACNA1D-228ENST00000638120 POLR3AO14802 1390 aaPredicted RBP16.4■□□□□ 0.22
CACNA1D-228ENST00000638120 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
CACNA1D-228ENST00000638120 SETD1BQ9UPS6 1966 aaKnown RBP16.39■□□□□ 0.22
CACNA1D-228ENST00000638120 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
CACNA1D-228ENST00000638120 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
CACNA1D-228ENST00000638120 KIF20BQ96Q89 1820 aa16.39■□□□□ 0.21
CACNA1D-228ENST00000638120 CABP1Q9NZU7 370 aa16.38■□□□□ 0.21
CACNA1D-228ENST00000638120 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
CACNA1D-228ENST00000638120 NEFLP07196 543 aa16.37■□□□□ 0.21
CACNA1D-228ENST00000638120 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
CACNA1D-228ENST00000638120 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
CACNA1D-228ENST00000638120 SHPRHQ149N8 1683 aa16.36■□□□□ 0.21
CACNA1D-228ENST00000638120 TOPAZ1Q8N9V7 1692 aa16.36■□□□□ 0.21
CACNA1D-228ENST00000638120 PIK3R4Q99570 1358 aa16.36■□□□□ 0.21
CACNA1D-228ENST00000638120 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
CACNA1D-228ENST00000638120 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
CACNA1D-228ENST00000638120 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
CACNA1D-228ENST00000638120 MON2Q7Z3U7 1717 aa16.34■□□□□ 0.21
CACNA1D-228ENST00000638120 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
CACNA1D-228ENST00000638120 FKBP8Q14318 412 aa16.34■□□□□ 0.21
CACNA1D-228ENST00000638120 AKAP12Q02952 1782 aa16.34■□□□□ 0.21
CACNA1D-228ENST00000638120 ITSN1Q15811 1721 aa16.34■□□□□ 0.21
CACNA1D-228ENST00000638120 NUDT16Q96DE0 195 aaKnown RBP16.33■□□□□ 0.21
CACNA1D-228ENST00000638120 EDC4Q6P2E9 1401 aaKnown RBP16.33■□□□□ 0.2
CACNA1D-228ENST00000638120 FYB1O15117 783 aa16.33■□□□□ 0.2
CACNA1D-228ENST00000638120 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.2
CACNA1D-228ENST00000638120 PDE3BQ13370 1112 aa16.32■□□□□ 0.2
CACNA1D-228ENST00000638120 ANKLE2Q86XL3 938 aa16.32■□□□□ 0.2
CACNA1D-228ENST00000638120 CCDC61Q9Y6R9 512 aa16.32■□□□□ 0.2
CACNA1D-228ENST00000638120 PRR36Q9H6K5 1346 aa16.32■□□□□ 0.2
CACNA1D-228ENST00000638120 GGNBP2Q9H3C7 697 aa16.31■□□□□ 0.2
CACNA1D-228ENST00000638120 MTHFSP49914 203 aa16.3■□□□□ 0.2
CACNA1D-228ENST00000638120 CHD2O14647 1828 aaKnown RBP16.29■□□□□ 0.2
CACNA1D-228ENST00000638120 CFAP53Q96M91 514 aa16.29■□□□□ 0.2
CACNA1D-228ENST00000638120 NRKQ7Z2Y5 1582 aa16.28■□□□□ 0.2
CACNA1D-228ENST00000638120 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
CACNA1D-228ENST00000638120 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
CACNA1D-228ENST00000638120 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
CACNA1D-228ENST00000638120 NKTRP30414 1462 aaKnown RBP16.26■□□□□ 0.19
CACNA1D-228ENST00000638120 KCNA6P17658 529 aa16.26■□□□□ 0.19
CACNA1D-228ENST00000638120 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
CACNA1D-228ENST00000638120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACNA1D-228ENST00000638120 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
CACNA1D-228ENST00000638120 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
CACNA1D-228ENST00000638120 CCDC146Q8IYE0 955 aa16.24■□□□□ 0.19
CACNA1D-228ENST00000638120 ZNF521Q96K83 1311 aa16.24■□□□□ 0.19
CACNA1D-228ENST00000638120 FMN2Q9NZ56 1722 aa16.23■□□□□ 0.19
CACNA1D-228ENST00000638120 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
CACNA1D-228ENST00000638120 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
CACNA1D-228ENST00000638120 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms