RNA–Protein interactions for RNA: ENST00000637924.1

LINC00604-202, long intergenic non-protein coding RNA 604, humanhuman

TSL 5 BASIC

Gene LINC00604, Length 684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00604-202ENST00000637924 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
LINC00604-202ENST00000637924 PTCH1Q13635 1447 aa12.76□□□□□ -0.37
LINC00604-202ENST00000637924 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
LINC00604-202ENST00000637924 PLEKHH1Q9ULM0 1364 aa12.75□□□□□ -0.37
LINC00604-202ENST00000637924 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
LINC00604-202ENST00000637924 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
LINC00604-202ENST00000637924 SOS2Q07890 1332 aaPredicted RBP12.73□□□□□ -0.37
LINC00604-202ENST00000637924 C14orf93Q9H972 538 aaKnown RBP12.73□□□□□ -0.37
LINC00604-202ENST00000637924 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
LINC00604-202ENST00000637924 POGKQ9P215 609 aa12.72□□□□□ -0.37
LINC00604-202ENST00000637924 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
LINC00604-202ENST00000637924 LMOD2Q6P5Q4 547 aa12.71□□□□□ -0.37
LINC00604-202ENST00000637924 DCAF11Q8TEB1 546 aa12.71□□□□□ -0.37
LINC00604-202ENST00000637924 PRAM1Q96QH2 718 aa12.71□□□□□ -0.37
LINC00604-202ENST00000637924 USP21Q9UK80 565 aa12.71□□□□□ -0.37
LINC00604-202ENST00000637924 NALCNQ8IZF0 1738 aa12.71□□□□□ -0.38
LINC00604-202ENST00000637924 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
LINC00604-202ENST00000637924 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
LINC00604-202ENST00000637924 RBM6P78332 1123 aaKnown RBP12.7□□□□□ -0.38
LINC00604-202ENST00000637924 TRAK1Q9UPV9 953 aa12.7□□□□□ -0.38
LINC00604-202ENST00000637924 YTHDC2Q9H6S0 1430 aaKnown RBP12.7□□□□□ -0.38
LINC00604-202ENST00000637924 PPLO60437 1756 aa12.69□□□□□ -0.38
LINC00604-202ENST00000637924 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
LINC00604-202ENST00000637924 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00604-202ENST00000637924 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
LINC00604-202ENST00000637924 SHPRHQ149N8 1683 aa12.68□□□□□ -0.38
LINC00604-202ENST00000637924 KRT28Q7Z3Y7 464 aa12.68□□□□□ -0.38
LINC00604-202ENST00000637924 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
LINC00604-202ENST00000637924 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
LINC00604-202ENST00000637924 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
LINC00604-202ENST00000637924 PSME1Q06323 249 aa12.66□□□□□ -0.38
LINC00604-202ENST00000637924 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
LINC00604-202ENST00000637924 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
LINC00604-202ENST00000637924 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
LINC00604-202ENST00000637924 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
LINC00604-202ENST00000637924 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.38
LINC00604-202ENST00000637924 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
LINC00604-202ENST00000637924 PRAG1Q86YV5 1406 aa12.64□□□□□ -0.39
LINC00604-202ENST00000637924 TECPR2O15040 1411 aa12.63□□□□□ -0.39
LINC00604-202ENST00000637924 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
LINC00604-202ENST00000637924 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
LINC00604-202ENST00000637924 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
LINC00604-202ENST00000637924 RGS12O14924 1447 aa12.61□□□□□ -0.39
LINC00604-202ENST00000637924 CDC42BPGQ6DT37 1551 aa12.6□□□□□ -0.39
LINC00604-202ENST00000637924 HRCP23327 699 aa12.6□□□□□ -0.39
LINC00604-202ENST00000637924 MYOM2P54296 1465 aa12.59□□□□□ -0.39
LINC00604-202ENST00000637924 PXDNQ92626 1479 aa12.59□□□□□ -0.39
LINC00604-202ENST00000637924 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
LINC00604-202ENST00000637924 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
LINC00604-202ENST00000637924 NRXN1Q9ULB1 1477 aa12.59□□□□□ -0.39
LINC00604-202ENST00000637924 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
LINC00604-202ENST00000637924 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
LINC00604-202ENST00000637924 IFT172Q9UG01 1749 aa12.57□□□□□ -0.4
LINC00604-202ENST00000637924 WASLO00401 505 aaPredicted RBP12.57□□□□□ -0.4
LINC00604-202ENST00000637924 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
LINC00604-202ENST00000637924 A0A0G2JS52 829 aa12.56□□□□□ -0.4
LINC00604-202ENST00000637924 MYT1Q01538 1121 aa12.56□□□□□ -0.4
LINC00604-202ENST00000637924 ATRNO75882 1429 aa12.55□□□□□ -0.4
LINC00604-202ENST00000637924 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
LINC00604-202ENST00000637924 PRR36Q9H6K5 1346 aa12.55□□□□□ -0.4
LINC00604-202ENST00000637924 GPRASP1Q5JY77 1395 aa12.55□□□□□ -0.4
LINC00604-202ENST00000637924 BCL9LQ86UU0 1499 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 NEUROD1Q13562 356 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 NUTM2GQ5VZR2 741 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
LINC00604-202ENST00000637924 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 LAMC1P11047 1609 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 TNS3Q68CZ2 1445 aa12.54□□□□□ -0.4
LINC00604-202ENST00000637924 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
LINC00604-202ENST00000637924 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
LINC00604-202ENST00000637924 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
LINC00604-202ENST00000637924 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
LINC00604-202ENST00000637924 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
LINC00604-202ENST00000637924 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
LINC00604-202ENST00000637924 ARHGEF10O15013 1369 aa12.52□□□□□ -0.41
LINC00604-202ENST00000637924 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
LINC00604-202ENST00000637924 ANKARQ7Z5J8 1434 aa12.51□□□□□ -0.41
LINC00604-202ENST00000637924 DLC1Q96QB1 1528 aa12.51□□□□□ -0.41
LINC00604-202ENST00000637924 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
LINC00604-202ENST00000637924 SRPK2P78362 688 aaKnown RBP12.5□□□□□ -0.41
LINC00604-202ENST00000637924 VPS72Q15906 364 aa12.5□□□□□ -0.41
LINC00604-202ENST00000637924 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
LINC00604-202ENST00000637924 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
LINC00604-202ENST00000637924 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
LINC00604-202ENST00000637924 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
LINC00604-202ENST00000637924 RALGAPBQ86X10 1494 aa12.48□□□□□ -0.41
LINC00604-202ENST00000637924 ZC3H6P61129 1189 aaKnown RBP12.48□□□□□ -0.41
LINC00604-202ENST00000637924 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
LINC00604-202ENST00000637924 L3MBTL2Q969R5 705 aa12.48□□□□□ -0.41
LINC00604-202ENST00000637924 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
LINC00604-202ENST00000637924 PRDM11Q9NQV5 511 aa12.48□□□□□ -0.41
LINC00604-202ENST00000637924 RGPD8O14715 1765 aaPredicted RBP12.48□□□□□ -0.41
LINC00604-202ENST00000637924 SLIT2O94813 1529 aa12.47□□□□□ -0.41
LINC00604-202ENST00000637924 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
LINC00604-202ENST00000637924 SF3B2Q13435 895 aaKnown RBP12.47□□□□□ -0.41
LINC00604-202ENST00000637924 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
LINC00604-202ENST00000637924 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
LINC00604-202ENST00000637924 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms