RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 L3MBTL2Q969R5 705 aa6.56□□□□□ -1.36
TCF4-288ENST00000637923 ATP2B1P20020 1258 aa6.56□□□□□ -1.36
TCF4-288ENST00000637923 TTC39AQ5SRH9 613 aa6.56□□□□□ -1.36
TCF4-288ENST00000637923 ZPR1O75312 459 aa6.56□□□□□ -1.36
TCF4-288ENST00000637923 FMN1Q68DA7 1419 aa6.56□□□□□ -1.36
TCF4-288ENST00000637923 SIL1Q9H173 461 aa6.56□□□□□ -1.36
TCF4-288ENST00000637923 CCDC97Q96F63 343 aaPredicted RBP6.55□□□□□ -1.36
TCF4-288ENST00000637923 UACAQ9BZF9 1416 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 RALBP1Q15311 655 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 CCDC47Q96A33 483 aaKnown RBP6.55□□□□□ -1.36
TCF4-288ENST00000637923 WDHD1O75717 1129 aaPredicted RBP6.55□□□□□ -1.36
TCF4-288ENST00000637923 FAM161AQ3B820 660 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 AFAP1Q8N556 730 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 KIF3AQ9Y496 699 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 E9PSI1 815 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 CPLX2Q6PUV4 134 aaKnown RBP6.55□□□□□ -1.36
TCF4-288ENST00000637923 ZNF622Q969S3 477 aaKnown RBP eCLIP6.55□□□□□ -1.36
TCF4-288ENST00000637923 SCLT1Q96NL6 688 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 C8orf37Q96NL8 207 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 ZHX3Q9H4I2 956 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 FANCD2Q9BXW9 1451 aa6.55□□□□□ -1.36
TCF4-288ENST00000637923 SMG6Q86US8 1419 aaKnown RBP6.55□□□□□ -1.36
TCF4-288ENST00000637923 VTI1AQ96AJ9 217 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 GBP4Q96PP9 640 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 MYO15BQ96JP2 1530 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 RSPH4AQ5TD94 716 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 MPHOSPH8Q99549 860 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 AQRO60306 1485 aaKnown RBP eCLIP6.54□□□□□ -1.36
TCF4-288ENST00000637923 RALYLQ86SE5 291 aaKnown RBP6.54□□□□□ -1.36
TCF4-288ENST00000637923 ANKIB1Q9P2G1 1089 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 ARHGAP5Q13017 1502 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 MTHFSP49914 203 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 CSPP1Q1MSJ5 1256 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 PLEKHO1Q53GL0 409 aaPredicted RBP6.54□□□□□ -1.36
TCF4-288ENST00000637923 NOP58Q9Y2X3 529 aaKnown RBP6.54□□□□□ -1.36
TCF4-288ENST00000637923 ST18O60284 1047 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 MPRIPQ6WCQ1 1025 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 PRAM1Q96QH2 718 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 TBC1D2BQ9UPU7 963 aa6.54□□□□□ -1.36
TCF4-288ENST00000637923 DHX57Q6P158 1386 aaKnown RBP6.54□□□□□ -1.36
TCF4-288ENST00000637923 PTCD1O75127 700 aaKnown RBP6.53□□□□□ -1.36
TCF4-288ENST00000637923 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
TCF4-288ENST00000637923 CEBPAP49715 358 aaPredicted RBP6.53□□□□□ -1.36
TCF4-288ENST00000637923 SYAP1Q96A49 352 aaPredicted RBP6.53□□□□□ -1.36
TCF4-288ENST00000637923 CADPSQ9ULU8 1353 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 HSP90AB2PQ58FF8 381 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 GOLGA6L1Q8N7Z2 621 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 SLC4A8Q2Y0W8 1093 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 TRMT1LQ7Z2T5 733 aaKnown RBP6.53□□□□□ -1.36
TCF4-288ENST00000637923 USP5P45974 858 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 SKIDA1Q1XH10 827 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 CDK5RAP3Q96JB5 506 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 PODXL2Q9NZ53 605 aa6.53□□□□□ -1.36
TCF4-288ENST00000637923 RAB3GAP2Q9H2M9 1393 aa6.52□□□□□ -1.37
TCF4-288ENST00000637923 MAP4K4O95819 1239 aaPredicted RBP6.52□□□□□ -1.37
TCF4-288ENST00000637923 GNL3LQ9NVN8 582 aaKnown RBP6.52□□□□□ -1.37
TCF4-288ENST00000637923 ZNF644Q9H582 1327 aaPredicted RBP6.52□□□□□ -1.37
TCF4-288ENST00000637923 SLC3A2P08195 630 aaKnown RBP6.52□□□□□ -1.37
TCF4-288ENST00000637923 TPM1P09493 284 aa6.52□□□□□ -1.37
TCF4-288ENST00000637923 RUFY2Q8WXA3 655 aa6.52□□□□□ -1.37
TCF4-288ENST00000637923 SPG7Q9UQ90 795 aa6.52□□□□□ -1.37
TCF4-288ENST00000637923 COG6Q9Y2V7 657 aa6.52□□□□□ -1.37
TCF4-288ENST00000637923 WIZO95785 1651 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 GOLGA6L19H0YKK7 550 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 BRMS1Q9HCU9 246 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 APAF1O14727 1248 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 UBTFL1P0CB47 393 aaPredicted RBP6.51□□□□□ -1.37
TCF4-288ENST00000637923 ZKSCAN1P17029 563 aaPredicted RBP6.51□□□□□ -1.37
TCF4-288ENST00000637923 ACSBG1Q96GR2 724 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 TMOD2Q9NZR1 351 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 BECN2A8MW95 431 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 SAFBQ15424 915 aaKnown RBP eCLIP6.51□□□□□ -1.37
TCF4-288ENST00000637923 TTLL5Q6EMB2 1281 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 VPS37CA5D8V6 355 aaPredicted RBP6.51□□□□□ -1.37
TCF4-288ENST00000637923 ZNF76P36508 570 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 FKBP4Q02790 459 aaKnown RBP eCLIP6.51□□□□□ -1.37
TCF4-288ENST00000637923 RPGRQ92834 1020 aaKnown RBP6.51□□□□□ -1.37
TCF4-288ENST00000637923 RAD54L2Q9Y4B4 1467 aa6.51□□□□□ -1.37
TCF4-288ENST00000637923 AK7Q96M32 723 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 FSD1Q9BTV5 496 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 BIN2Q9UBW5 565 aaPredicted RBP6.5□□□□□ -1.37
TCF4-288ENST00000637923 NUP133Q8WUM0 1156 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 ZNF592Q92610 1267 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 RAI14Q9P0K7 980 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 RAPGEF2Q9Y4G8 1499 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 ZNF530Q6P9A1 599 aaPredicted RBP6.5□□□□□ -1.37
TCF4-288ENST00000637923 USHBP1Q8N6Y0 703 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 CRBNQ96SW2 442 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 NLRP13Q86W25 1043 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 BICD2Q8TD16 824 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 CDK19Q9BWU1 502 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 CRACR2BQ8N4Y2 399 aaPredicted RBP6.5□□□□□ -1.37
TCF4-288ENST00000637923 RRS1Q15050 365 aaKnown RBP6.5□□□□□ -1.37
TCF4-288ENST00000637923 ZKSCAN2Q63HK3 967 aa6.5□□□□□ -1.37
TCF4-288ENST00000637923 LIG1P18858 919 aa6.49□□□□□ -1.37
TCF4-288ENST00000637923 RBM26Q5T8P6 1007 aaKnown RBP6.49□□□□□ -1.37
TCF4-288ENST00000637923 CCDC158Q5M9N0 1113 aa6.49□□□□□ -1.37
TCF4-288ENST00000637923 TMOD3Q9NYL9 352 aa6.49□□□□□ -1.37
TCF4-288ENST00000637923 NEBLO76041 1014 aa6.49□□□□□ -1.37
TCF4-288ENST00000637923 MROH2BQ7Z745 1585 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms