RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 POGKQ9P215 609 aa25■■□□□ 1.59
CLN5-219ENST00000637537 PTPRMP28827 1452 aa24.99■■□□□ 1.59
CLN5-219ENST00000637537 PLPPR3Q6T4P5 718 aa24.98■■□□□ 1.59
CLN5-219ENST00000637537 CEBPAP49715 358 aaPredicted RBP24.97■■□□□ 1.59
CLN5-219ENST00000637537 SRPK2P78362 688 aaKnown RBP24.97■■□□□ 1.59
CLN5-219ENST00000637537 TNNT2P45379 298 aaPredicted RBP24.97■■□□□ 1.59
CLN5-219ENST00000637537 WDR43Q15061 677 aaKnown RBP eCLIP24.95■■□□□ 1.58
CLN5-219ENST00000637537 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.58
CLN5-219ENST00000637537 TNRQ92752 1358 aa24.94■■□□□ 1.58
CLN5-219ENST00000637537 WAPLQ7Z5K2 1190 aa24.93■■□□□ 1.58
CLN5-219ENST00000637537 CDCA7LQ96GN5 454 aa24.92■■□□□ 1.58
CLN5-219ENST00000637537 MORC1Q86VD1 984 aa24.9■■□□□ 1.58
CLN5-219ENST00000637537 PUS7Q96PZ0 661 aaKnown RBP24.89■■□□□ 1.57
CLN5-219ENST00000637537 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
CLN5-219ENST00000637537 ANKRD36BQ8N2N9 1353 aa24.88■■□□□ 1.57
CLN5-219ENST00000637537 METP08581 1390 aa24.87■■□□□ 1.57
CLN5-219ENST00000637537 CCDC146Q8IYE0 955 aa24.87■■□□□ 1.57
CLN5-219ENST00000637537 SETD1AO15047 1707 aaKnown RBP24.86■■□□□ 1.57
CLN5-219ENST00000637537 CGNL1Q0VF96 1302 aa24.86■■□□□ 1.57
CLN5-219ENST00000637537 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.86■■□□□ 1.57
CLN5-219ENST00000637537 CDK19Q9BWU1 502 aa24.86■■□□□ 1.57
CLN5-219ENST00000637537 NRXN3Q9Y4C0 1643 aa24.86■■□□□ 1.57
CLN5-219ENST00000637537 A0A1W2PP64 1363 aa24.85■■□□□ 1.57
CLN5-219ENST00000637537 INSRP06213 1382 aa24.85■■□□□ 1.57
CLN5-219ENST00000637537 TXNDC2Q86VQ3 553 aa24.82■■□□□ 1.56
CLN5-219ENST00000637537 TMEM2Q9UHN6 1383 aa24.82■■□□□ 1.56
CLN5-219ENST00000637537 UBR1Q8IWV7 1749 aa24.82■■□□□ 1.56
CLN5-219ENST00000637537 PDE3BQ13370 1112 aa24.8■■□□□ 1.56
CLN5-219ENST00000637537 ATAD2Q6PL18 1390 aa24.8■■□□□ 1.56
CLN5-219ENST00000637537 CABP1Q9NZU7 370 aa24.79■■□□□ 1.56
CLN5-219ENST00000637537 LTKP29376 864 aa24.79■■□□□ 1.56
CLN5-219ENST00000637537 HDGFP51858 240 aaKnown RBP24.79■■□□□ 1.56
CLN5-219ENST00000637537 RNF123Q5XPI4 1314 aa24.79■■□□□ 1.56
CLN5-219ENST00000637537 ABCC11Q96J66 1382 aa24.78■■□□□ 1.56
CLN5-219ENST00000637537 ERICH6Q7L0X2 663 aa24.78■■□□□ 1.56
CLN5-219ENST00000637537 GGNBP2Q9H3C7 697 aa24.78■■□□□ 1.56
CLN5-219ENST00000637537 USP32Q8NFA0 1604 aa24.77■■□□□ 1.56
CLN5-219ENST00000637537 MTHFSP49914 203 aa24.77■■□□□ 1.56
CLN5-219ENST00000637537 PPP4R2Q9NY27 417 aa24.77■■□□□ 1.56
CLN5-219ENST00000637537 CD163L1Q9NR16 1453 aa24.76■■□□□ 1.55
CLN5-219ENST00000637537 ERICH6BQ5W0A0 696 aa24.76■■□□□ 1.55
CLN5-219ENST00000637537 B4GALNT3Q6L9W6 998 aa24.76■■□□□ 1.55
CLN5-219ENST00000637537 DLC1Q96QB1 1528 aa24.76■■□□□ 1.55
CLN5-219ENST00000637537 POLR3AO14802 1390 aaPredicted RBP24.76■■□□□ 1.55
CLN5-219ENST00000637537 APAF1O14727 1248 aa24.75■■□□□ 1.55
CLN5-219ENST00000637537 TERF2IPQ9NYB0 399 aa24.75■■□□□ 1.55
CLN5-219ENST00000637537 RCAN3Q9UKA8 241 aa24.75■■□□□ 1.55
CLN5-219ENST00000637537 NINLQ9Y2I6 1382 aa24.75■■□□□ 1.55
CLN5-219ENST00000637537 C3P01024 1663 aa24.75■■□□□ 1.55
CLN5-219ENST00000637537 FER1L4A9Z1Z3 1794 aa24.72■■□□□ 1.55
CLN5-219ENST00000637537 FYB1O15117 783 aa24.71■■□□□ 1.55
CLN5-219ENST00000637537 SLC26A8Q96RN1 970 aa24.71■■□□□ 1.55
CLN5-219ENST00000637537 NLRP1Q9C000 1473 aa24.7■■□□□ 1.54
CLN5-219ENST00000637537 HDGFL2Q7Z4V5 671 aaPredicted RBP24.7■■□□□ 1.54
CLN5-219ENST00000637537 NCKAP5LQ9HCH0 1330 aa24.69■■□□□ 1.54
CLN5-219ENST00000637537 ADAMTS13Q76LX8 1427 aa24.69■■□□□ 1.54
CLN5-219ENST00000637537 NSD2O96028 1365 aa24.69■■□□□ 1.54
CLN5-219ENST00000637537 ZNF521Q96K83 1311 aa24.69■■□□□ 1.54
CLN5-219ENST00000637537 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
CLN5-219ENST00000637537 SHPRHQ149N8 1683 aa24.68■■□□□ 1.54
CLN5-219ENST00000637537 RRP1P56182 461 aaKnown RBP24.68■■□□□ 1.54
CLN5-219ENST00000637537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.68■■□□□ 1.54
CLN5-219ENST00000637537 ROBO2Q9HCK4 1378 aa24.65■■□□□ 1.54
CLN5-219ENST00000637537 GOLGA2Q08379 1002 aa24.65■■□□□ 1.54
CLN5-219ENST00000637537 DUSP27Q5VZP5 1158 aa24.64■■□□□ 1.54
CLN5-219ENST00000637537 SPINK5Q9NQ38 1064 aaPredicted RBP24.64■■□□□ 1.54
CLN5-219ENST00000637537 EID1Q9Y6B2 187 aa24.64■■□□□ 1.54
CLN5-219ENST00000637537 PLEKHG1Q9ULL1 1385 aa24.64■■□□□ 1.53
CLN5-219ENST00000637537 CFAP53Q96M91 514 aa24.64■■□□□ 1.53
CLN5-219ENST00000637537 PLIN1O60240 522 aa24.63■■□□□ 1.53
CLN5-219ENST00000637537 NEUROD2Q15784 382 aa24.63■■□□□ 1.53
CLN5-219ENST00000637537 TECPR2O15040 1411 aa24.62■■□□□ 1.53
CLN5-219ENST00000637537 FBLN1P23142 703 aa24.62■■□□□ 1.53
CLN5-219ENST00000637537 DMRT2Q9Y5R5 561 aa24.62■■□□□ 1.53
CLN5-219ENST00000637537 RRP7AQ9Y3A4 280 aaKnown RBP24.62■■□□□ 1.53
CLN5-219ENST00000637537 FAM135BQ49AJ0 1406 aa24.61■■□□□ 1.53
CLN5-219ENST00000637537 NUDT16Q96DE0 195 aaKnown RBP24.61■■□□□ 1.53
CLN5-219ENST00000637537 PPIP5K1Q6PFW1 1433 aa24.61■■□□□ 1.53
CLN5-219ENST00000637537 DEKP35659 375 aaKnown RBP24.61■■□□□ 1.53
CLN5-219ENST00000637537 KNDC1Q76NI1 1749 aa24.6■■□□□ 1.53
CLN5-219ENST00000637537 NUTM2FA1L443 756 aa24.6■■□□□ 1.53
CLN5-219ENST00000637537 CPS1P31327 1500 aa24.6■■□□□ 1.53
CLN5-219ENST00000637537 U2AF1L5P0DN76 240 aaPredicted RBP24.58■■□□□ 1.53
CLN5-219ENST00000637537 U2AF1Q01081 240 aaKnown RBP eCLIP24.58■■□□□ 1.53
CLN5-219ENST00000637537 SLFN5Q08AF3 891 aa24.58■■□□□ 1.53
CLN5-219ENST00000637537 SIRT1Q96EB6 747 aa24.58■■□□□ 1.52
CLN5-219ENST00000637537 PTPRUQ92729 1446 aa24.57■■□□□ 1.52
CLN5-219ENST00000637537 THEMISQ8N1K5 641 aaPredicted RBP24.57■■□□□ 1.52
CLN5-219ENST00000637537 EXOC6Q8TAG9 804 aa24.57■■□□□ 1.52
CLN5-219ENST00000637537 ATP7BP35670 1465 aa24.57■■□□□ 1.52
CLN5-219ENST00000637537 PRR36Q9H6K5 1346 aa24.56■■□□□ 1.52
CLN5-219ENST00000637537 TCP11L2Q8N4U5 519 aa24.56■■□□□ 1.52
CLN5-219ENST00000637537 RUNDC1Q96C34 613 aa24.56■■□□□ 1.52
CLN5-219ENST00000637537 CCDC61Q9Y6R9 512 aa24.56■■□□□ 1.52
CLN5-219ENST00000637537 CCDC136Q96JN2 1154 aa24.55■■□□□ 1.52
CLN5-219ENST00000637537 SLIT1O75093 1534 aa24.55■■□□□ 1.52
CLN5-219ENST00000637537 ANKRD26Q9UPS8 1709 aa24.55■■□□□ 1.52
CLN5-219ENST00000637537 ARHGAP23Q9P227 1491 aa24.54■■□□□ 1.52
CLN5-219ENST00000637537 U2SURPO15042 1029 aaKnown RBP24.54■■□□□ 1.52
CLN5-219ENST00000637537 WWC1Q8IX03 1113 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms