RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 MCTP1Q6DN14 999 aa11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 RRP1P56182 461 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 IRX3P78415 501 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 CAGE1Q8TC20 777 aa11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 RNF20Q5VTR2 975 aa11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 ZNF644Q9H582 1327 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 REC8O95072 547 aa11.7□□□□□ -0.54
CACNA1A-242ENST00000637485 BICD2Q8TD16 824 aa11.69□□□□□ -0.54
CACNA1A-242ENST00000637485 ERICH4A6NGS2 130 aa11.69□□□□□ -0.54
CACNA1A-242ENST00000637485 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-242ENST00000637485 POLA1P09884 1462 aaPredicted RBP11.69□□□□□ -0.54
CACNA1A-242ENST00000637485 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 CGNQ9P2M7 1197 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 KIF7Q2M1P5 1343 aa11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 GPATCH11Q8N954 259 aa11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 FAM107BQ9H098 131 aa11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 NPHP1O15259 732 aa11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 FOXD4L6Q3SYB3 417 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 FOXD4L3Q6VB84 417 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 TSPY26PQ9H489 355 aa11.68□□□□□ -0.54
CACNA1A-242ENST00000637485 ARHGAP5Q13017 1502 aa11.67□□□□□ -0.54
CACNA1A-242ENST00000637485 EXOC6Q8TAG9 804 aa11.67□□□□□ -0.54
CACNA1A-242ENST00000637485 CCDC47Q96A33 483 aaKnown RBP11.67□□□□□ -0.54
CACNA1A-242ENST00000637485 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
CACNA1A-242ENST00000637485 PLEKHH2Q8IVE3 1493 aa11.67□□□□□ -0.54
CACNA1A-242ENST00000637485 AMPHP49418 695 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 GRPEL1Q9HAV7 217 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 HFM1A2PYH4 1435 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 GOLGA6L10A6NI86 522 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 COG3Q96JB2 828 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
CACNA1A-242ENST00000637485 SUPT6HQ7KZ85 1726 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-242ENST00000637485 TRIM5Q9C035 493 aa11.65□□□□□ -0.54
CACNA1A-242ENST00000637485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.65□□□□□ -0.54
CACNA1A-242ENST00000637485 NESP48681 1621 aa11.65□□□□□ -0.54
CACNA1A-242ENST00000637485 FRAT2O75474 233 aaPredicted RBP11.65□□□□□ -0.55
CACNA1A-242ENST00000637485 ZSCAN30Q86W11 494 aa11.65□□□□□ -0.55
CACNA1A-242ENST00000637485 ZKSCAN2Q63HK3 967 aa11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 RNF214Q8ND24 703 aa11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 CLUAP1Q96AJ1 413 aa11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 BRD4O60885 1362 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 PRDM10Q9NQV6 1147 aa11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 TROQ12816 1431 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-242ENST00000637485 CENPHQ9H3R5 247 aa11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 PRG4Q92954 1404 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 GTF2A1P52655 376 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 NAP1L1P55209 391 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 ABCA10Q8WWZ4 1543 aa11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 TIGD1Q96MW7 591 aa11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 CRBNQ96SW2 442 aa11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 C22orf23Q9BZE7 217 aa11.63□□□□□ -0.55
CACNA1A-242ENST00000637485 CBX1P83916 185 aa11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 KIAA1107Q9UPP5 1409 aa11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 CPLX2Q6PUV4 134 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 BCL11BQ9C0K0 894 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 CUL7Q14999 1698 aa11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 RABEP1Q15276 862 aa11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 ZHX1Q9UKY1 873 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-242ENST00000637485 SHTN1A0MZ66 631 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 PDIA4P13667 645 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 C9orf84Q5VXU9 1444 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 ZKSCAN1P17029 563 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 SKIDA1Q1XH10 827 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 ANKRD45Q5TZF3 282 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 OLFM4Q6UX06 510 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 IPO4Q8TEX9 1081 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 SMC3Q9UQE7 1217 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 CHMP3Q9Y3E7 222 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 ERLIN2O94905 339 aa11.61□□□□□ -0.55
CACNA1A-242ENST00000637485 MARCH6O60337 910 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 DIAPH1O60610 1272 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 SSR1P43307 286 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 AAMPQ13685 434 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 APAF1O14727 1248 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 RUFY2Q8WXA3 655 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 SMARCE1Q969G3 411 aa11.6□□□□□ -0.55
CACNA1A-242ENST00000637485 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 PDILTQ8N807 584 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 LAMC3Q9Y6N6 1575 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 TRIM29Q14134 588 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 TMCO3Q6UWJ1 677 aa11.59□□□□□ -0.55
CACNA1A-242ENST00000637485 AKAP17AQ02040 695 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms