RNA–Protein interactions for RNA: ENST00000637350.1

CHRNA7-227, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,241 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-227ENST00000637350 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
CHRNA7-227ENST00000637350 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.23
CHRNA7-227ENST00000637350 EVC2Q86UK5 1308 aa22.69■■□□□ 1.22
CHRNA7-227ENST00000637350 PUS7Q96PZ0 661 aaKnown RBP22.68■■□□□ 1.22
CHRNA7-227ENST00000637350 INSRP06213 1382 aa22.68■■□□□ 1.22
CHRNA7-227ENST00000637350 PPP2R1AP30153 589 aa22.67■■□□□ 1.22
CHRNA7-227ENST00000637350 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
CHRNA7-227ENST00000637350 TULP4Q9NRJ4 1543 aa22.67■■□□□ 1.22
CHRNA7-227ENST00000637350 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.22
CHRNA7-227ENST00000637350 POGKQ9P215 609 aa22.66■■□□□ 1.22
CHRNA7-227ENST00000637350 RIMS1Q86UR5 1692 aaKnown RBP22.66■■□□□ 1.22
CHRNA7-227ENST00000637350 CDCA7LQ96GN5 454 aa22.65■■□□□ 1.22
CHRNA7-227ENST00000637350 DLC1Q96QB1 1528 aa22.65■■□□□ 1.22
CHRNA7-227ENST00000637350 MYT1Q01538 1121 aa22.65■■□□□ 1.22
CHRNA7-227ENST00000637350 ABCC11Q96J66 1382 aa22.64■■□□□ 1.21
CHRNA7-227ENST00000637350 METP08581 1390 aa22.63■■□□□ 1.21
CHRNA7-227ENST00000637350 ADAMTSL3P82987 1691 aa22.63■■□□□ 1.21
CHRNA7-227ENST00000637350 SLIT1O75093 1534 aa22.62■■□□□ 1.21
CHRNA7-227ENST00000637350 NPC1L1Q9UHC9 1359 aa22.62■■□□□ 1.21
CHRNA7-227ENST00000637350 LTKP29376 864 aa22.62■■□□□ 1.21
CHRNA7-227ENST00000637350 EID1Q9Y6B2 187 aa22.62■■□□□ 1.21
CHRNA7-227ENST00000637350 PLEKHG1Q9ULL1 1385 aa22.61■■□□□ 1.21
CHRNA7-227ENST00000637350 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
CHRNA7-227ENST00000637350 THEMISQ8N1K5 641 aaPredicted RBP22.61■■□□□ 1.21
CHRNA7-227ENST00000637350 ADAMTS8Q9UP79 889 aa22.61■■□□□ 1.21
CHRNA7-227ENST00000637350 ARHGAP23Q9P227 1491 aa22.61■■□□□ 1.21
CHRNA7-227ENST00000637350 RRP1P56182 461 aaKnown RBP22.59■■□□□ 1.21
CHRNA7-227ENST00000637350 MINK1Q8N4C8 1332 aaPredicted RBP22.59■■□□□ 1.21
CHRNA7-227ENST00000637350 PDE3BQ13370 1112 aa22.59■■□□□ 1.21
CHRNA7-227ENST00000637350 CARD14Q9BXL6 1004 aa22.59■■□□□ 1.21
CHRNA7-227ENST00000637350 SLC12A5Q9H2X9 1139 aa22.59■■□□□ 1.21
CHRNA7-227ENST00000637350 CABP2Q9NPB3 220 aa22.58■■□□□ 1.21
CHRNA7-227ENST00000637350 RCAN3Q9UKA8 241 aa22.58■■□□□ 1.21
CHRNA7-227ENST00000637350 ADAMTS13Q76LX8 1427 aa22.58■■□□□ 1.21
CHRNA7-227ENST00000637350 SRPK2P78362 688 aaKnown RBP22.57■■□□□ 1.2
CHRNA7-227ENST00000637350 KNDC1Q76NI1 1749 aa22.56■■□□□ 1.2
CHRNA7-227ENST00000637350 CEP170BQ9Y4F5 1589 aaPredicted RBP22.55■■□□□ 1.2
CHRNA7-227ENST00000637350 PLEKHH1Q9ULM0 1364 aa22.55■■□□□ 1.2
CHRNA7-227ENST00000637350 TECPR2O15040 1411 aa22.55■■□□□ 1.2
CHRNA7-227ENST00000637350 WAPLQ7Z5K2 1190 aa22.55■■□□□ 1.2
CHRNA7-227ENST00000637350 NINLQ9Y2I6 1382 aa22.55■■□□□ 1.2
CHRNA7-227ENST00000637350 ATAD2Q6PL18 1390 aa22.54■■□□□ 1.2
CHRNA7-227ENST00000637350 SIRT1Q96EB6 747 aa22.54■■□□□ 1.2
CHRNA7-227ENST00000637350 CCDC136Q96JN2 1154 aa22.54■■□□□ 1.2
CHRNA7-227ENST00000637350 FAM135BQ49AJ0 1406 aa22.53■■□□□ 1.2
CHRNA7-227ENST00000637350 MED14O60244 1454 aa22.52■■□□□ 1.2
CHRNA7-227ENST00000637350 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
CHRNA7-227ENST00000637350 NSD3Q9BZ95 1437 aa22.52■■□□□ 1.2
CHRNA7-227ENST00000637350 CPS1P31327 1500 aa22.52■■□□□ 1.2
CHRNA7-227ENST00000637350 SETD1BQ9UPS6 1966 aaKnown RBP22.51■■□□□ 1.19
CHRNA7-227ENST00000637350 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
CHRNA7-227ENST00000637350 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
CHRNA7-227ENST00000637350 SHPRHQ149N8 1683 aa22.5■■□□□ 1.19
CHRNA7-227ENST00000637350 EXOC6Q8TAG9 804 aa22.5■■□□□ 1.19
CHRNA7-227ENST00000637350 USP32Q8NFA0 1604 aa22.48■■□□□ 1.19
CHRNA7-227ENST00000637350 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
CHRNA7-227ENST00000637350 ZNF142P52746 1687 aaPredicted RBP22.48■■□□□ 1.19
CHRNA7-227ENST00000637350 MSH5O43196 834 aa22.47■■□□□ 1.19
CHRNA7-227ENST00000637350 TBX22Q9Y458 520 aa22.47■■□□□ 1.19
CHRNA7-227ENST00000637350 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
CHRNA7-227ENST00000637350 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
CHRNA7-227ENST00000637350 DIP2AQ14689 1571 aa22.45■■□□□ 1.18
CHRNA7-227ENST00000637350 PLIN1O60240 522 aa22.44■■□□□ 1.18
CHRNA7-227ENST00000637350 CCDC146Q8IYE0 955 aa22.44■■□□□ 1.18
CHRNA7-227ENST00000637350 A0A1W2PP64 1363 aa22.44■■□□□ 1.18
CHRNA7-227ENST00000637350 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
CHRNA7-227ENST00000637350 FANCIQ9NVI1 1328 aa22.44■■□□□ 1.18
CHRNA7-227ENST00000637350 WASLO00401 505 aaPredicted RBP22.43■■□□□ 1.18
CHRNA7-227ENST00000637350 TERF2IPQ9NYB0 399 aa22.43■■□□□ 1.18
CHRNA7-227ENST00000637350 ANP32EQ9BTT0 268 aa22.42■■□□□ 1.18
CHRNA7-227ENST00000637350 PTPRUQ92729 1446 aa22.42■■□□□ 1.18
CHRNA7-227ENST00000637350 CD163L1Q9NR16 1453 aa22.4■■□□□ 1.18
CHRNA7-227ENST00000637350 NSD2O96028 1365 aa22.4■■□□□ 1.18
CHRNA7-227ENST00000637350 CABP1Q9NZU7 370 aa22.4■■□□□ 1.18
CHRNA7-227ENST00000637350 DUSP27Q5VZP5 1158 aa22.39■■□□□ 1.18
CHRNA7-227ENST00000637350 MORC1Q86VD1 984 aa22.39■■□□□ 1.18
CHRNA7-227ENST00000637350 AMOTL2Q9Y2J4 779 aa22.39■■□□□ 1.18
CHRNA7-227ENST00000637350 ANKLE2Q86XL3 938 aa22.39■■□□□ 1.17
CHRNA7-227ENST00000637350 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
CHRNA7-227ENST00000637350 PTCH1Q13635 1447 aa22.36■■□□□ 1.17
CHRNA7-227ENST00000637350 ATP7BP35670 1465 aa22.36■■□□□ 1.17
CHRNA7-227ENST00000637350 ADGRB2O60241 1585 aa22.36■■□□□ 1.17
CHRNA7-227ENST00000637350 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.35■■□□□ 1.17
CHRNA7-227ENST00000637350 POLR3AO14802 1390 aaPredicted RBP22.35■■□□□ 1.17
CHRNA7-227ENST00000637350 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
CHRNA7-227ENST00000637350 APAF1O14727 1248 aa22.35■■□□□ 1.17
CHRNA7-227ENST00000637350 GOLGA2Q08379 1002 aa22.34■■□□□ 1.17
CHRNA7-227ENST00000637350 C20orf194Q5TEA3 1177 aa22.34■■□□□ 1.17
CHRNA7-227ENST00000637350 CRBNQ96SW2 442 aa22.34■■□□□ 1.17
CHRNA7-227ENST00000637350 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
CHRNA7-227ENST00000637350 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.17
CHRNA7-227ENST00000637350 NUDT16Q96DE0 195 aaKnown RBP22.33■■□□□ 1.17
CHRNA7-227ENST00000637350 PPIP5K1Q6PFW1 1433 aa22.33■■□□□ 1.17
CHRNA7-227ENST00000637350 CCDC61Q9Y6R9 512 aa22.33■■□□□ 1.16
CHRNA7-227ENST00000637350 XRN1Q8IZH2 1706 aaKnown RBP22.33■■□□□ 1.16
CHRNA7-227ENST00000637350 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
CHRNA7-227ENST00000637350 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
CHRNA7-227ENST00000637350 KDM4FA0A1W2PPD8 638 aa22.3■■□□□ 1.16
CHRNA7-227ENST00000637350 ANKRD26Q9UPS8 1709 aa22.29■■□□□ 1.16
CHRNA7-227ENST00000637350 FYB1O15117 783 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms