RNA–Protein interactions for RNA: ENST00000637328.1

LINC01548-202, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 1 (best)

Gene LINC01548, Length 454 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-202ENST00000637328 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.23
LINC01548-202ENST00000637328 USP47Q96K76 1375 aa16.46■□□□□ 0.23
LINC01548-202ENST00000637328 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
LINC01548-202ENST00000637328 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
LINC01548-202ENST00000637328 AHDC1Q5TGY3 1603 aaPredicted RBP16.43■□□□□ 0.22
LINC01548-202ENST00000637328 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
LINC01548-202ENST00000637328 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
LINC01548-202ENST00000637328 BCANQ96GW7 911 aa16.42■□□□□ 0.22
LINC01548-202ENST00000637328 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
LINC01548-202ENST00000637328 ST20-MTHFSA0A0A6YYL1 179 aa16.4■□□□□ 0.22
LINC01548-202ENST00000637328 NGLY1Q96IV0 654 aa16.4■□□□□ 0.22
LINC01548-202ENST00000637328 LAMC1P11047 1609 aa16.4■□□□□ 0.22
LINC01548-202ENST00000637328 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
LINC01548-202ENST00000637328 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
LINC01548-202ENST00000637328 C8orf37Q96NL8 207 aa16.38■□□□□ 0.21
LINC01548-202ENST00000637328 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
LINC01548-202ENST00000637328 LRP5O75197 1615 aa16.37■□□□□ 0.21
LINC01548-202ENST00000637328 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
LINC01548-202ENST00000637328 TRAK1Q9UPV9 953 aa16.36■□□□□ 0.21
LINC01548-202ENST00000637328 STK26Q9P289 416 aa16.35■□□□□ 0.21
LINC01548-202ENST00000637328 C11orf95C9JLR9 678 aaPredicted RBP16.34■□□□□ 0.21
LINC01548-202ENST00000637328 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
LINC01548-202ENST00000637328 ASXL1Q8IXJ9 1541 aa16.33■□□□□ 0.2
LINC01548-202ENST00000637328 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
LINC01548-202ENST00000637328 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
LINC01548-202ENST00000637328 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
LINC01548-202ENST00000637328 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
LINC01548-202ENST00000637328 NCOA3Q9Y6Q9 1424 aa16.32■□□□□ 0.2
LINC01548-202ENST00000637328 ADAMTS13Q76LX8 1427 aa16.31■□□□□ 0.2
LINC01548-202ENST00000637328 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
LINC01548-202ENST00000637328 METP08581 1390 aa16.31■□□□□ 0.2
LINC01548-202ENST00000637328 BRINP3Q76B58 766 aa16.31■□□□□ 0.2
LINC01548-202ENST00000637328 TESK2Q96S53 571 aa16.31■□□□□ 0.2
LINC01548-202ENST00000637328 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
LINC01548-202ENST00000637328 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
LINC01548-202ENST00000637328 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
LINC01548-202ENST00000637328 CCDC7Q96M83 1385 aa16.29■□□□□ 0.2
LINC01548-202ENST00000637328 KIF7Q2M1P5 1343 aa16.29■□□□□ 0.2
LINC01548-202ENST00000637328 CENPJQ9HC77 1338 aaPredicted RBP16.29■□□□□ 0.2
LINC01548-202ENST00000637328 ATF3P18847 181 aa16.29■□□□□ 0.2
LINC01548-202ENST00000637328 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
LINC01548-202ENST00000637328 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
LINC01548-202ENST00000637328 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
LINC01548-202ENST00000637328 C19orf44Q9H6X5 657 aa16.28■□□□□ 0.2
LINC01548-202ENST00000637328 TMF1P82094 1093 aa16.27■□□□□ 0.2
LINC01548-202ENST00000637328 LRRC59Q96AG4 307 aaKnown RBP16.26■□□□□ 0.19
LINC01548-202ENST00000637328 POGKQ9P215 609 aa16.26■□□□□ 0.19
LINC01548-202ENST00000637328 TRPC5Q9UL62 973 aaPredicted RBP16.26■□□□□ 0.19
LINC01548-202ENST00000637328 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
LINC01548-202ENST00000637328 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
LINC01548-202ENST00000637328 YY1P25490 414 aa16.25■□□□□ 0.19
LINC01548-202ENST00000637328 SAFB2Q14151 953 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC01548-202ENST00000637328 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
LINC01548-202ENST00000637328 CHD2O14647 1828 aaKnown RBP16.24■□□□□ 0.19
LINC01548-202ENST00000637328 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
LINC01548-202ENST00000637328 USP21Q9UK80 565 aa16.24■□□□□ 0.19
LINC01548-202ENST00000637328 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
LINC01548-202ENST00000637328 PNPLA6Q8IY17 1366 aa16.23■□□□□ 0.19
LINC01548-202ENST00000637328 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
LINC01548-202ENST00000637328 DEFB132Q7Z7B7 95 aa16.22■□□□□ 0.19
LINC01548-202ENST00000637328 AMOTL2Q9Y2J4 779 aa16.22■□□□□ 0.19
LINC01548-202ENST00000637328 NHSL1Q5SYE7 1610 aa16.22■□□□□ 0.19
LINC01548-202ENST00000637328 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
LINC01548-202ENST00000637328 BLMP54132 1417 aaPredicted RBP16.21■□□□□ 0.19
LINC01548-202ENST00000637328 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
LINC01548-202ENST00000637328 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
LINC01548-202ENST00000637328 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
LINC01548-202ENST00000637328 SIRT1Q96EB6 747 aa16.21■□□□□ 0.19
LINC01548-202ENST00000637328 ARHGEF28Q8N1W1 1705 aaKnown RBP16.21■□□□□ 0.19
LINC01548-202ENST00000637328 ATRNO75882 1429 aa16.2■□□□□ 0.18
LINC01548-202ENST00000637328 PLEKHH1Q9ULM0 1364 aa16.2■□□□□ 0.18
LINC01548-202ENST00000637328 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
LINC01548-202ENST00000637328 TECPR2O15040 1411 aa16.19■□□□□ 0.18
LINC01548-202ENST00000637328 PIK3R4Q99570 1358 aa16.19■□□□□ 0.18
LINC01548-202ENST00000637328 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
LINC01548-202ENST00000637328 ROBO2Q9HCK4 1378 aa16.18■□□□□ 0.18
LINC01548-202ENST00000637328 EVC2Q86UK5 1308 aa16.18■□□□□ 0.18
LINC01548-202ENST00000637328 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
LINC01548-202ENST00000637328 PSDA5PKW4 1024 aaPredicted RBP16.17■□□□□ 0.18
LINC01548-202ENST00000637328 KNDC1Q76NI1 1749 aa16.15■□□□□ 0.18
LINC01548-202ENST00000637328 DDX17Q92841 729 aaKnown RBP16.15■□□□□ 0.18
LINC01548-202ENST00000637328 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
LINC01548-202ENST00000637328 DCCP43146 1447 aa16.12■□□□□ 0.17
LINC01548-202ENST00000637328 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
LINC01548-202ENST00000637328 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
LINC01548-202ENST00000637328 SF3B2Q13435 895 aaKnown RBP16.12■□□□□ 0.17
LINC01548-202ENST00000637328 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
LINC01548-202ENST00000637328 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
LINC01548-202ENST00000637328 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
LINC01548-202ENST00000637328 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
LINC01548-202ENST00000637328 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
LINC01548-202ENST00000637328 MST1RQ04912 1400 aa16.11■□□□□ 0.17
LINC01548-202ENST00000637328 MIER1Q8N108 512 aa16.1■□□□□ 0.17
LINC01548-202ENST00000637328 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
LINC01548-202ENST00000637328 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
LINC01548-202ENST00000637328 GJD4Q96KN9 370 aaPredicted RBP16.09■□□□□ 0.17
LINC01548-202ENST00000637328 PANK3Q9H999 370 aa16.09■□□□□ 0.17
LINC01548-202ENST00000637328 CEP350Q5VT06 3117 aa16.09■□□□□ 0.17
LINC01548-202ENST00000637328 ANP32CO43423 234 aa16.06■□□□□ 0.16
LINC01548-202ENST00000637328 SLC12A5Q9H2X9 1139 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms