RNA–Protein interactions for RNA: ENST00000637168.1

CACNA1A-237, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 2,979 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-237ENST00000637168 NUP160Q12769 1436 aa12.52□□□□□ -0.4
CACNA1A-237ENST00000637168 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.4
CACNA1A-237ENST00000637168 CLEC17AQ6ZS10 378 aa12.52□□□□□ -0.4
CACNA1A-237ENST00000637168 TROQ12816 1431 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-237ENST00000637168 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
CACNA1A-237ENST00000637168 ZNF445P59923 1031 aa12.52□□□□□ -0.41
CACNA1A-237ENST00000637168 PDLIM2Q96JY6 352 aa12.51□□□□□ -0.41
CACNA1A-237ENST00000637168 ZHX1Q9UKY1 873 aaPredicted RBP12.51□□□□□ -0.41
CACNA1A-237ENST00000637168 NUP153P49790 1475 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-237ENST00000637168 RARSP54136 660 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-237ENST00000637168 SYNMO15061 1565 aa12.51□□□□□ -0.41
CACNA1A-237ENST00000637168 ZKSCAN5Q9Y2L8 839 aa12.51□□□□□ -0.41
CACNA1A-237ENST00000637168 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
CACNA1A-237ENST00000637168 DDX49Q9Y6V7 483 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-237ENST00000637168 ARHGAP31Q2M1Z3 1444 aa12.5□□□□□ -0.41
CACNA1A-237ENST00000637168 XPCQ01831 940 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-237ENST00000637168 A2MP01023 1474 aa12.5□□□□□ -0.41
CACNA1A-237ENST00000637168 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 CDCA8Q53HL2 280 aa12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 CCDC141Q6ZP82 1450 aa12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 PDE4CQ08493 712 aa12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 GTPBP4Q9BZE4 634 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 SHROOM2Q13796 1616 aa12.49□□□□□ -0.41
CACNA1A-237ENST00000637168 RLBP1P12271 317 aa12.48□□□□□ -0.41
CACNA1A-237ENST00000637168 ZSCAN20P17040 1043 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-237ENST00000637168 PRDM10Q9NQV6 1147 aa12.48□□□□□ -0.41
CACNA1A-237ENST00000637168 RAPGEF6Q8TEU7 1601 aa12.48□□□□□ -0.41
CACNA1A-237ENST00000637168 KIF20AO95235 890 aa12.48□□□□□ -0.41
CACNA1A-237ENST00000637168 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
CACNA1A-237ENST00000637168 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-237ENST00000637168 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-237ENST00000637168 MVPQ14764 893 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-237ENST00000637168 RGL3Q3MIN7 710 aa12.46□□□□□ -0.41
CACNA1A-237ENST00000637168 CCDC39Q9UFE4 941 aa12.46□□□□□ -0.41
CACNA1A-237ENST00000637168 GRIN2AQ12879 1464 aa12.46□□□□□ -0.42
CACNA1A-237ENST00000637168 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.42
CACNA1A-237ENST00000637168 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.42
CACNA1A-237ENST00000637168 K7ELQ4 463 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-237ENST00000637168 ARID3AQ99856 593 aa12.45□□□□□ -0.42
CACNA1A-237ENST00000637168 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-237ENST00000637168 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-237ENST00000637168 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
CACNA1A-237ENST00000637168 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
CACNA1A-237ENST00000637168 SSFA2P28290 1259 aa12.44□□□□□ -0.42
CACNA1A-237ENST00000637168 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
CACNA1A-237ENST00000637168 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
CACNA1A-237ENST00000637168 CDC42BPAQ5VT25 1732 aa12.44□□□□□ -0.42
CACNA1A-237ENST00000637168 MYO5CQ9NQX4 1742 aa12.43□□□□□ -0.42
CACNA1A-237ENST00000637168 RBSNQ9H1K0 784 aa12.43□□□□□ -0.42
CACNA1A-237ENST00000637168 TNNQ9UQP3 1299 aa12.43□□□□□ -0.42
CACNA1A-237ENST00000637168 KIAA0556O60303 1618 aa12.43□□□□□ -0.42
CACNA1A-237ENST00000637168 MYRIPQ8NFW9 859 aa12.43□□□□□ -0.42
CACNA1A-237ENST00000637168 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-237ENST00000637168 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
CACNA1A-237ENST00000637168 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
CACNA1A-237ENST00000637168 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
CACNA1A-237ENST00000637168 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-237ENST00000637168 FTSJ3Q8IY81 847 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-237ENST00000637168 KANK1Q14678 1352 aa12.41□□□□□ -0.42
CACNA1A-237ENST00000637168 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
CACNA1A-237ENST00000637168 PBRM1Q86U86 1689 aa12.41□□□□□ -0.42
CACNA1A-237ENST00000637168 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-237ENST00000637168 KIF2CQ99661 725 aa12.41□□□□□ -0.42
CACNA1A-237ENST00000637168 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
CACNA1A-237ENST00000637168 POLR3AO14802 1390 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-237ENST00000637168 NUCB2P80303 420 aa12.4□□□□□ -0.42
CACNA1A-237ENST00000637168 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-237ENST00000637168 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
CACNA1A-237ENST00000637168 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
CACNA1A-237ENST00000637168 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
CACNA1A-237ENST00000637168 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 DISP1Q96F81 1524 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 IQGAP1P46940 1657 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 MYOM1P52179 1685 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 GTF2F1P35269 517 aaKnown RBP eCLIP12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 MCTP1Q6DN14 999 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 DDX19BQ9UMR2 479 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 ADAMTS12P58397 1594 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 RUNDC1Q96C34 613 aa12.39□□□□□ -0.43
CACNA1A-237ENST00000637168 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-237ENST00000637168 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
CACNA1A-237ENST00000637168 CT47B1P0C2W7 299 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-237ENST00000637168 BMP2KLQ5H9B9 411 aa12.38□□□□□ -0.43
CACNA1A-237ENST00000637168 LRSAM1Q6UWE0 723 aa12.38□□□□□ -0.43
CACNA1A-237ENST00000637168 CCDC27Q2M243 656 aa12.37□□□□□ -0.43
CACNA1A-237ENST00000637168 ARHGEF5Q12774 1597 aa12.37□□□□□ -0.43
CACNA1A-237ENST00000637168 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
CACNA1A-237ENST00000637168 CBX1P83916 185 aa12.36□□□□□ -0.43
CACNA1A-237ENST00000637168 NUCB1Q02818 461 aa12.36□□□□□ -0.43
CACNA1A-237ENST00000637168 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-237ENST00000637168 DNTTIP2Q5QJE6 756 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms