RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
CACNA1A-232ENST00000636966 TRAK1Q9UPV9 953 aa11.44□□□□□ -0.58
CACNA1A-232ENST00000636966 CRYBG1Q9Y4K1 1723 aa11.44□□□□□ -0.58
CACNA1A-232ENST00000636966 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
CACNA1A-232ENST00000636966 PLEKHG1Q9ULL1 1385 aa11.44□□□□□ -0.58
CACNA1A-232ENST00000636966 PTPRUQ92729 1446 aa11.44□□□□□ -0.58
CACNA1A-232ENST00000636966 DISP3Q9P2K9 1392 aa11.43□□□□□ -0.58
CACNA1A-232ENST00000636966 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-232ENST00000636966 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
CACNA1A-232ENST00000636966 STK26Q9P289 416 aa11.42□□□□□ -0.58
CACNA1A-232ENST00000636966 KIF7Q2M1P5 1343 aa11.42□□□□□ -0.58
CACNA1A-232ENST00000636966 YTHDC2Q9H6S0 1430 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-232ENST00000636966 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
CACNA1A-232ENST00000636966 MON2Q7Z3U7 1717 aa11.41□□□□□ -0.58
CACNA1A-232ENST00000636966 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.41□□□□□ -0.58
CACNA1A-232ENST00000636966 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
CACNA1A-232ENST00000636966 SBNO2Q9Y2G9 1366 aa11.4□□□□□ -0.58
CACNA1A-232ENST00000636966 PHRF1Q9P1Y6 1649 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-232ENST00000636966 ANP32CO43423 234 aa11.4□□□□□ -0.58
CACNA1A-232ENST00000636966 WAPLQ7Z5K2 1190 aa11.39□□□□□ -0.59
CACNA1A-232ENST00000636966 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
CACNA1A-232ENST00000636966 CCDC7Q96M83 1385 aa11.39□□□□□ -0.59
CACNA1A-232ENST00000636966 SAFB2Q14151 953 aaKnown RBP eCLIP11.38□□□□□ -0.59
CACNA1A-232ENST00000636966 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
CACNA1A-232ENST00000636966 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
CACNA1A-232ENST00000636966 ANKLE2Q86XL3 938 aa11.37□□□□□ -0.59
CACNA1A-232ENST00000636966 ITSN1Q15811 1721 aa11.37□□□□□ -0.59
CACNA1A-232ENST00000636966 MST1RQ04912 1400 aa11.37□□□□□ -0.59
CACNA1A-232ENST00000636966 PRAM1Q96QH2 718 aa11.37□□□□□ -0.59
CACNA1A-232ENST00000636966 LRPPRCP42704 1394 aaKnown RBP11.36□□□□□ -0.59
CACNA1A-232ENST00000636966 BCANQ96GW7 911 aa11.36□□□□□ -0.59
CACNA1A-232ENST00000636966 TULP4Q9NRJ4 1543 aa11.36□□□□□ -0.59
CACNA1A-232ENST00000636966 ABCC11Q96J66 1382 aa11.36□□□□□ -0.59
CACNA1A-232ENST00000636966 RBM33Q96EV2 1170 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-232ENST00000636966 TBX22Q9Y458 520 aa11.35□□□□□ -0.59
CACNA1A-232ENST00000636966 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-232ENST00000636966 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
CACNA1A-232ENST00000636966 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-232ENST00000636966 CENPJQ9HC77 1338 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-232ENST00000636966 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
CACNA1A-232ENST00000636966 KCNA6P17658 529 aa11.34□□□□□ -0.59
CACNA1A-232ENST00000636966 DAXXQ9UER7 740 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-232ENST00000636966 AMOTL2Q9Y2J4 779 aa11.33□□□□□ -0.6
CACNA1A-232ENST00000636966 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
CACNA1A-232ENST00000636966 CDC42BPGQ6DT37 1551 aa11.32□□□□□ -0.6
CACNA1A-232ENST00000636966 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-232ENST00000636966 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-232ENST00000636966 EIF3AQ14152 1382 aaKnown RBP11.31□□□□□ -0.6
CACNA1A-232ENST00000636966 PIK3R4Q99570 1358 aa11.29□□□□□ -0.6
CACNA1A-232ENST00000636966 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
CACNA1A-232ENST00000636966 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-232ENST00000636966 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
CACNA1A-232ENST00000636966 NEFLP07196 543 aa11.29□□□□□ -0.6
CACNA1A-232ENST00000636966 TMF1P82094 1093 aa11.29□□□□□ -0.6
CACNA1A-232ENST00000636966 NCOA3Q9Y6Q9 1424 aa11.28□□□□□ -0.6
CACNA1A-232ENST00000636966 CAMTA1Q9Y6Y1 1673 aa11.28□□□□□ -0.6
CACNA1A-232ENST00000636966 KIF20BQ96Q89 1820 aa11.27□□□□□ -0.6
CACNA1A-232ENST00000636966 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.6
CACNA1A-232ENST00000636966 POGKQ9P215 609 aa11.27□□□□□ -0.6
CACNA1A-232ENST00000636966 IQSEC2Q5JU85 1478 aa11.27□□□□□ -0.61
CACNA1A-232ENST00000636966 SIRT1Q96EB6 747 aa11.27□□□□□ -0.61
CACNA1A-232ENST00000636966 SHPRHQ149N8 1683 aa11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 NKTRP30414 1462 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 SLC12A5Q9H2X9 1139 aa11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 CD163L1Q9NR16 1453 aa11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 CDK19Q9BWU1 502 aa11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 CARD14Q9BXL6 1004 aa11.26□□□□□ -0.61
CACNA1A-232ENST00000636966 ABCA3Q99758 1704 aa11.25□□□□□ -0.61
CACNA1A-232ENST00000636966 KIF1AQ12756 1690 aa11.25□□□□□ -0.61
CACNA1A-232ENST00000636966 NHSL1Q5SYE7 1610 aa11.25□□□□□ -0.61
CACNA1A-232ENST00000636966 ZNF335Q9H4Z2 1342 aaPredicted RBP11.24□□□□□ -0.61
CACNA1A-232ENST00000636966 PANK3Q9H999 370 aa11.24□□□□□ -0.61
CACNA1A-232ENST00000636966 LTBP4Q8N2S1 1624 aa11.24□□□□□ -0.61
CACNA1A-232ENST00000636966 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
CACNA1A-232ENST00000636966 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
CACNA1A-232ENST00000636966 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-232ENST00000636966 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
CACNA1A-232ENST00000636966 EVC2Q86UK5 1308 aa11.22□□□□□ -0.61
CACNA1A-232ENST00000636966 COL22A1Q8NFW1 1626 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-232ENST00000636966 ATP7BP35670 1465 aa11.22□□□□□ -0.61
CACNA1A-232ENST00000636966 PUS7Q96PZ0 661 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-232ENST00000636966 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-232ENST00000636966 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-232ENST00000636966 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
CACNA1A-232ENST00000636966 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
CACNA1A-232ENST00000636966 CCDC184Q52MB2 194 aa11.2□□□□□ -0.62
CACNA1A-232ENST00000636966 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
CACNA1A-232ENST00000636966 ABCC6O95255 1503 aa11.19□□□□□ -0.62
CACNA1A-232ENST00000636966 RGPD1P0DJD0 1748 aa11.19□□□□□ -0.62
CACNA1A-232ENST00000636966 A0A1W2PP64 1363 aa11.19□□□□□ -0.62
CACNA1A-232ENST00000636966 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
CACNA1A-232ENST00000636966 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
CACNA1A-232ENST00000636966 AMER1Q5JTC6 1135 aaPredicted RBP11.18□□□□□ -0.62
CACNA1A-232ENST00000636966 NUDT16Q96DE0 195 aaKnown RBP11.18□□□□□ -0.62
CACNA1A-232ENST00000636966 TMEM94Q12767 1356 aa11.18□□□□□ -0.62
CACNA1A-232ENST00000636966 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
CACNA1A-232ENST00000636966 ADGRL3Q9HAR2 1447 aa11.17□□□□□ -0.62
CACNA1A-232ENST00000636966 HNRNPUQ00839 825 aaKnown RBP eCLIP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms