RNA–Protein interactions for RNA: ENST00000636905.1

SYNGAP1-218, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-218ENST00000636905 NSD2O96028 1365 aa7.4□□□□□ -1.22
SYNGAP1-218ENST00000636905 ATAD2Q6PL18 1390 aa7.4□□□□□ -1.22
SYNGAP1-218ENST00000636905 ANKRD36BQ8N2N9 1353 aa7.4□□□□□ -1.22
SYNGAP1-218ENST00000636905 ABCC11Q96J66 1382 aa7.4□□□□□ -1.22
SYNGAP1-218ENST00000636905 ANKRD26Q9UPS8 1709 aa7.4□□□□□ -1.23
SYNGAP1-218ENST00000636905 NSD3Q9BZ95 1437 aa7.39□□□□□ -1.23
SYNGAP1-218ENST00000636905 SLC12A5Q9H2X9 1139 aa7.39□□□□□ -1.23
SYNGAP1-218ENST00000636905 STK26Q9P289 416 aa7.39□□□□□ -1.23
SYNGAP1-218ENST00000636905 POLR3AO14802 1390 aaPredicted RBP7.38□□□□□ -1.23
SYNGAP1-218ENST00000636905 TMEM2Q9UHN6 1383 aa7.38□□□□□ -1.23
SYNGAP1-218ENST00000636905 CGNL1Q0VF96 1302 aa7.38□□□□□ -1.23
SYNGAP1-218ENST00000636905 WDR43Q15061 677 aaKnown RBP eCLIP7.38□□□□□ -1.23
SYNGAP1-218ENST00000636905 PRAM1Q96QH2 718 aa7.38□□□□□ -1.23
SYNGAP1-218ENST00000636905 FAM135BQ49AJ0 1406 aa7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 RNF123Q5XPI4 1314 aa7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 TRHP20396 242 aaPredicted RBP7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 SRPK2P78362 688 aaKnown RBP7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 MORC1Q86VD1 984 aa7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 NGEFQ8N5V2 710 aa7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 TERF2IPQ9NYB0 399 aa7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 ADAMTS8Q9UP79 889 aa7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 CPS1P31327 1500 aa7.37□□□□□ -1.23
SYNGAP1-218ENST00000636905 MED14O60244 1454 aa7.36□□□□□ -1.23
SYNGAP1-218ENST00000636905 TECPR2O15040 1411 aa7.36□□□□□ -1.23
SYNGAP1-218ENST00000636905 KIF20BQ96Q89 1820 aa7.36□□□□□ -1.23
SYNGAP1-218ENST00000636905 MINK1Q8N4C8 1332 aaPredicted RBP7.36□□□□□ -1.23
SYNGAP1-218ENST00000636905 CABP2Q9NPB3 220 aa7.36□□□□□ -1.23
SYNGAP1-218ENST00000636905 SLIT1O75093 1534 aa7.36□□□□□ -1.23
SYNGAP1-218ENST00000636905 PLEKHG1Q9ULL1 1385 aa7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 SHPRHQ149N8 1683 aa7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 HDGFL2Q7Z4V5 671 aaPredicted RBP7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 CDK19Q9BWU1 502 aa7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 PPP4R2Q9NY27 417 aa7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 ATP7BP35670 1465 aa7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 ARHGAP23Q9P227 1491 aa7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 SETD1BQ9UPS6 1966 aaKnown RBP7.35□□□□□ -1.23
SYNGAP1-218ENST00000636905 CFAP53Q96M91 514 aa7.34□□□□□ -1.23
SYNGAP1-218ENST00000636905 EID1Q9Y6B2 187 aa7.34□□□□□ -1.23
SYNGAP1-218ENST00000636905 ADAMTS13Q76LX8 1427 aa7.34□□□□□ -1.23
SYNGAP1-218ENST00000636905 A0A1W2PP64 1363 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 METP08581 1390 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 DIP2AQ14689 1571 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 AKAP12Q02952 1782 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 ITSN1Q15811 1721 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 CD163L1Q9NR16 1453 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 WASLO00401 505 aaPredicted RBP7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 WAPLQ7Z5K2 1190 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 THEMISQ8N1K5 641 aaPredicted RBP7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 BCANQ96GW7 911 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 ADGRB2O60241 1585 aa7.33□□□□□ -1.24
SYNGAP1-218ENST00000636905 MAP2P11137 1827 aaKnown RBP7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 CEBPAP49715 358 aaPredicted RBP7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 NCBP3Q53F19 620 aaKnown RBP7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 TXNDC2Q86VQ3 553 aa7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 SENP3Q9H4L4 574 aaPredicted RBP7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 TBX22Q9Y458 520 aa7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 MON2Q7Z3U7 1717 aa7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 PLEKHH1Q9ULM0 1364 aa7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 ADAMTSL3P82987 1691 aa7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 RIMS1Q86UR5 1692 aaKnown RBP7.32□□□□□ -1.24
SYNGAP1-218ENST00000636905 ZNF521Q96K83 1311 aa7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 FYB1O15117 783 aa7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 LTKP29376 864 aa7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 MTHFSP49914 203 aa7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 GOLGA2Q08379 1002 aa7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 CABP1Q9NZU7 370 aa7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 RCAN3Q9UKA8 241 aa7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 SALL2Q9Y467 1007 aaPredicted RBP7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 ZNF142P52746 1687 aaPredicted RBP7.31□□□□□ -1.24
SYNGAP1-218ENST00000636905 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.3□□□□□ -1.24
SYNGAP1-218ENST00000636905 CDC42BPGQ6DT37 1551 aa7.3□□□□□ -1.24
SYNGAP1-218ENST00000636905 CPSF1Q10570 1443 aaKnown RBP7.3□□□□□ -1.24
SYNGAP1-218ENST00000636905 EDC4Q6P2E9 1401 aaKnown RBP7.3□□□□□ -1.24
SYNGAP1-218ENST00000636905 IRX6P78412 446 aaPredicted RBP7.3□□□□□ -1.24
SYNGAP1-218ENST00000636905 RUNDC1Q96C34 613 aa7.3□□□□□ -1.24
SYNGAP1-218ENST00000636905 ZNF692Q9BU19 519 aaPredicted RBP7.3□□□□□ -1.24
SYNGAP1-218ENST00000636905 CEP170BQ9Y4F5 1589 aaPredicted RBP7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 TOPAZ1Q8N9V7 1692 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 PPIP5K1Q6PFW1 1433 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 APAF1O14727 1248 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 RRP1P56182 461 aaKnown RBP7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 SLFN5Q08AF3 891 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 TRMT2AQ8IZ69 625 aaKnown RBP7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 NUDT16Q96DE0 195 aaKnown RBP7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 CDCA7LQ96GN5 454 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 DNAJC5Q9H3Z4 198 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 CCDC61Q9Y6R9 512 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 PIK3R4Q99570 1358 aa7.29□□□□□ -1.24
SYNGAP1-218ENST00000636905 XRN1Q8IZH2 1706 aaKnown RBP7.28□□□□□ -1.24
SYNGAP1-218ENST00000636905 SENP3-EIF4A1A0A087X0R7 540 aa7.28□□□□□ -1.24
SYNGAP1-218ENST00000636905 TNNT2P45379 298 aaPredicted RBP7.28□□□□□ -1.24
SYNGAP1-218ENST00000636905 GGNBP2Q9H3C7 697 aa7.28□□□□□ -1.24
SYNGAP1-218ENST00000636905 CHD2O14647 1828 aaKnown RBP7.28□□□□□ -1.24
SYNGAP1-218ENST00000636905 ROBO2Q9HCK4 1378 aa7.28□□□□□ -1.24
SYNGAP1-218ENST00000636905 PTCH1Q13635 1447 aa7.27□□□□□ -1.24
SYNGAP1-218ENST00000636905 PTPRUQ92729 1446 aa7.27□□□□□ -1.24
SYNGAP1-218ENST00000636905 E9PSI1 815 aa7.27□□□□□ -1.25
SYNGAP1-218ENST00000636905 CCDC27Q2M243 656 aa7.27□□□□□ -1.25
SYNGAP1-218ENST00000636905 DUSP27Q5VZP5 1158 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms